RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SNX5Q9Y5X3 404 aa7.23□□□□□ -1.25
CLSTN1-204ENST00000464286 PARP14Q460N5 1801 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 ANK1P16157 1881 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 C7orf72A4D263 438 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 E7ENX8 843 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 VWA5AO00534 786 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SDHDO14521 159 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 PHGDHO43175 533 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 MRPS14O60783 128 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 TULP3O75386 442 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 ANXA9O76027 345 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SUPT7LO94864 414 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SORBS2O94875 1100 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 LDLRP01130 860 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 INHBBP09529 407 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 PDGFRBP09619 1106 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 FAM163BP0C2L3 166 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 ERVK-10P10266 1014 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 NID1P14543 1247 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 PTPN2P17706 415 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 POLR2EP19388 210 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 LRPAP1P30533 357 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 GNL1P36915 607 aaPredicted RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 RPS9P46781 194 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 HNRNPFP52597 415 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 BCAT1P54687 386 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 NAGLUP54802 743 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SOX10P56693 466 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 LAMTOR4Q0VGL1 99 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 NFATC3Q12968 1075 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 DGKZQ13574 1117 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CCINQ13939 588 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 TMEM132DQ14C87 1099 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 TGFBIQ15582 683 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 FAM187BQ17R55 369 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 C15orf59Q2T9L4 293 aaPredicted RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 AGKQ53H12 422 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 PPM1JQ5JR12 505 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 MEX3CQ5U5Q3 659 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 EGFLAMQ63HQ2 1017 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 DCAF15Q66K64 600 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 NCBP2-AS2Q69YL0 99 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 TMEM53Q6P2H8 277 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 PID1Q7Z2X4 250 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CBR4Q8N4T8 237 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CCNYL1Q8N7R7 359 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CCNYQ8ND76 341 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CHST13Q8NET6 341 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 TRPV3Q8NET8 790 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 PPHLN1Q8NEY8 458 aaKnown RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 OR13F1Q8NGS4 319 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 MAPK15Q8TD08 544 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 ARNTL2Q8WYA1 636 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SEPT1Q8WYJ6 367 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SLC35B4Q969S0 331 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 P2RY11Q96G91 374 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 FAM84AQ96KN4 292 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SNX27Q96L92 541 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 NPAS2Q99743 824 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CIB1Q99828 191 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 CORO1BQ9BR76 489 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 DCUN1D5Q9BTE7 237 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 OSBPL10Q9BXB5 764 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 MROQ9BYG7 248 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 ING2Q9H160 280 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 FZD8Q9H461 694 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 RMND5AQ9H871 391 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 AGPAT4Q9NRZ5 378 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 MTMR10Q9NXD2 777 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 GTSE1Q9NYZ3 720 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SPATA7Q9P0W8 599 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 TRPC5Q9UL62 973 aaPredicted RBP7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 SLC39A10Q9ULF5 831 aa7.22□□□□□ -1.25
CLSTN1-204ENST00000464286 ISPDA4D126 451 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SAGE2PA6NJ88 616 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 KCNU1A8MYU2 1149 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 C19orf81C9J6K1 198 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 BOLA2-SMG1P6H3BVE0 249 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 IFRD1O00458 451 aaPredicted RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 LSM1O15116 133 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PFDN6O15212 129 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC22A1O15245 554 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 XPOTO43592 962 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TBC1D4O60343 1298 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 DAB1O75553 588 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 SEC14L2O76054 403 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 ITGB3P05106 788 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 FURINP09958 794 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 MBL2P11226 248 aaPredicted RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PTPN1P18031 435 aaKnown RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TFE3P19532 575 aaPredicted RBP7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 PSMB4P28070 264 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 GSTM2P28161 218 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 IL12AP29459 219 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 HTR7P34969 479 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 TNFSF9P41273 254 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 MATKP42679 507 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 STT3AP46977 705 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 NEK2P51955 445 aa7.21□□□□□ -1.26
CLSTN1-204ENST00000464286 NDST1P52848 882 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms