RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 RASA4BC9J798 803 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 TEX33O43247 280 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 RASA4O43374 803 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 MMEP08473 750 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 ELFN1P0C7U0 828 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 EPHB2P29323 1055 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 STAT1P42224 750 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 ARSDP51689 593 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 YBEYP58557 167 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 TRA2AQ13595 282 aaKnown RBP eCLIP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 CYTH1Q15438 398 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 CLPPQ16740 277 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 NOP9Q86U38 636 aaKnown RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 CAMK1DQ8IU85 385 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 RTL3Q8N8U3 475 aaKnown RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 FAM172AQ8WUF8 416 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 DDA1Q9BW61 102 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 LGR4Q9BXB1 951 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 ASPSCR1Q9BZE9 553 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 WDR26Q9H7D7 661 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 CARS2Q9HA77 564 aaKnown RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 LRRC4CQ9HCJ2 640 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 SPATS2LQ9NUQ6 558 aaKnown RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 SLC39A1Q9NY26 324 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 UBA2Q9UBT2 640 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-224ENST00000464148 B3GALT1Q9Y5Z6 326 aa13.34□□□□□ -0.27
MRPL55-224ENST00000464148 USP9YO00507 2555 aaPredicted RBP13.33□□□□□ -0.27
MRPL55-224ENST00000464148 BLACEA4D250 179 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CLEC18AA5D8T8 446 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CFAP69A5D8W1 941 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 PDE2AO00408 941 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 BUB1BO60566 1050 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 RAD1O60671 282 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 ECEL1O95672 775 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 FGF1P05230 155 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 HOXC4P09017 264 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CCNB1P14635 433 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 MPSTP25325 297 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CD1CP29017 333 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 SERPINA4P29622 427 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 PPM1FP49593 454 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 LIMK2P53671 638 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 NOMO3P69849 1222 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 ILF3Q12906 894 aaKnown RBP eCLIP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 PARP15Q460N3 678 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 DCAF12Q5T6F0 453 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 NKAIN2Q5VXU1 208 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CLEC18BQ6UXF7 455 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 STRADAQ7RTN6 431 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 ZNF438Q7Z4V0 828 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 SLFN11Q7Z7L1 901 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 ZSWIM9Q86XI8 627 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 FAM129CQ86XR2 697 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 NRSN1Q8IZ57 195 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 CLEC18CQ8NCF0 446 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 KIAA1143Q96AT1 154 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-224ENST00000464148 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 GSDMCQ9BYG8 508 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 ATP13A3Q9H7F0 1226 aa13.33□□□□□ -0.28
MRPL55-224ENST00000464148 A8MX80 341 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 NKX2-8O15522 239 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 CREB3O43889 395 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 TRIM23P36406 574 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 PTPN9P43378 593 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 GPR3P46089 330 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 HDAC4P56524 1084 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 NR1D2Q14995 579 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 ACOX1Q15067 660 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 PNCKQ6P2M8 343 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 SLC30A9Q6PML9 568 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 LIPIQ6XZB0 460 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 OR4D9Q8NGE8 314 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 SLC45A3Q96JT2 553 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 PSMG3-AS1Q96PY0 264 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 CATSPERBQ9H7T0 1116 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 GPN2Q9H9Y4 310 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-224ENST00000464148 TAAR2Q9P1P5 351 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 PLAAQ9Y263 795 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 FHOD1Q9Y613 1164 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 NBPF19A0A087WUL8 3843 aa13.32□□□□□ -0.28
MRPL55-224ENST00000464148 C2CD4BA6NLJ0 364 aa13.31□□□□□ -0.28
MRPL55-224ENST00000464148 EFCAB7A8K855 629 aa13.31□□□□□ -0.28
MRPL55-224ENST00000464148 PES1O00541 588 aaKnown RBP13.31□□□□□ -0.28
MRPL55-224ENST00000464148 MYCLP1P12525 358 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-224ENST00000464148 PRKCSHP14314 528 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-224ENST00000464148 AK4P27144 223 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-224ENST00000464148 GNPDA1P46926 289 aa13.31□□□□□ -0.28
MRPL55-224ENST00000464148 RAB15P59190 212 aa13.31□□□□□ -0.28
MRPL55-224ENST00000464148 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
MRPL55-224ENST00000464148 RALGDSQ12967 914 aa13.31□□□□□ -0.28
MRPL55-224ENST00000464148 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms