RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TNFSF15O95150 251 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 LCA5LO95447 670 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 ITGA2BP08514 1039 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 CD48P09326 243 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 H2AFZP0C0S5 128 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 RARAP10276 462 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 TSHRP16473 764 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 DESP17661 470 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 ERCC2P18074 760 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 ITIH2P19823 946 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 RBMS1P29558 406 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 ETFBP38117 255 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 TAS2R40P59535 323 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 SRSF6Q13247 344 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 SGCGQ13326 291 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 SERINC3Q13530 473 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 PIGHQ14442 188 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 POLD3Q15054 466 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 IRF4Q15306 451 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 KCTD16Q68DU8 428 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 LEKR1Q6ZMV7 388 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 RFX8Q6ZV50 586 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 H2AFVQ71UI9 128 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 POLNQ7Z5Q5 900 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 WDR36Q8NI36 951 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 PCDH19Q8TAB3 1148 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 FAM71BQ8TC56 605 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 BTN2A2Q8WVV5 523 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 CTNNBL1Q8WYA6 563 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 NAT6Q93015 286 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 MED8Q96G25 268 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 LIN37Q96GY3 246 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 CELF6Q96J87 481 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 KLHL32Q96NJ5 620 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 EIF3CQ99613 913 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 NCAPGQ9BPX3 1015 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 DEF6Q9H4E7 631 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 CATSPERBQ9H7T0 1116 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 PCDH18Q9HCL0 1135 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZNHIT6Q9NWK9 470 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 SPASTQ9UBP0 616 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 LHX3Q9UBR4 397 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 IP6K2Q9UHH9 426 aa7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 SPTBN1Q01082 2364 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-210ENST00000462553 A0A1W2PQM1 296 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 MYO1FO00160 1098 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 KRIT1O00522 736 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 YY2O15391 372 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 AKR1B10O60218 316 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 NOBOXO60393 691 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 IL4RP24394 825 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 MAN1A1P33908 653 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 HCAR3P49019 387 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZNF135P52742 658 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 NDST2P52849 883 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 THOP1P52888 689 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 YBEYP58557 167 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 YPEL5P62699 121 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 SPIDRQ14159 915 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ALG11Q2TAA5 492 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 MYLK3Q32MK0 819 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 PARP15Q460N3 678 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ATP13A4Q4VNC1 1196 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 PPP6R3Q5H9R7 873 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 FOXR1Q6PIV2 292 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 THSD4Q6ZMP0 1018 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ARHGAP36Q6ZRI8 547 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 TMEM139Q8IV31 216 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ARL10Q8N8L6 244 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 EXD3Q8N9H8 876 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 WDR48Q8TAF3 677 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 HSPH1Q92598 858 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC74AQ96AQ1 378 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC42Q96M95 316 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 CSPG4P5Q96PW8 444 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 OSBPL1AQ9BXW6 950 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC39A8Q9C0K1 460 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZWILCHQ9H900 591 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 CTTNBP2NLQ9P2B4 639 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 IPO11Q9UI26 975 aaKnown RBP7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ACSL6Q9UKU0 697 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 ATXN7L1Q9ULK2 861 aaPredicted RBP7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 PADI4Q9UM07 663 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 COQ6Q9Y2Z9 468 aa7.98□□□□□ -1.13
CDC42BPA-210ENST00000462553 TSPAN11A1L157 253 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZSCAN5CA6NGD5 496 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SOWAHDA6NJG2 315 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 H3BRJ5 948 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 J3KR12 359 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 NEMP1O14524 444 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PLD2O14939 933 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 INSIG1O15503 277 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC28A2O43868 658 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PRAMEF11O60813 436 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 MMP20O60882 483 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TM7SF2O76062 418 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms