RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 BMP8AQ7Z5Y6 402 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 RASSF3Q86WH2 238 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 ANKMY2Q8IV38 441 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 ZBED8Q8IZ13 594 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 TMEM105Q8N8V8 129 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 FBXO36Q8NEA4 188 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 CXorf40AQ8TE69 158 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 PYROXD1Q8WU10 500 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 LRRC39Q96DD0 335 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 CFAP36Q96G28 342 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 SIGLEC10Q96LC7 697 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 LYSMD1Q96S90 227 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 WRAP53Q9BUR4 548 aaKnown RBP9.79□□□□□ -0.84
C9orf78-203ENST00000461539 BTBD1Q9H0C5 482 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 CD93Q9NPY3 652 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 ITM2CQ9NQX7 267 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 USP36Q9P275 1121 aaKnown RBP9.79□□□□□ -0.84
C9orf78-203ENST00000461539 GGT7Q9UJ14 662 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 RAB21Q9UL25 225 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 FZD4Q9ULV1 537 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 CYP8B1Q9UNU6 501 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 CHMP2BQ9UQN3 213 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 TCAF1Q9Y4C2 921 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 KCTD3Q9Y597 815 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 ARL5AQ9Y689 179 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 PRUNE2Q8WUY3 3088 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 UNC80Q8N2C7 3258 aa9.79□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3DA0A087WVF3 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3IA0A087WXS9 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3EA0A087X179 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3KA0A087X1G2 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 MAGEB16A2A368 324 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 FAM86C2PA6NEL3 165 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3FA6NER0 549 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3LB9A6J9 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 E7ESA3 106 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 STX7O15400 261 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 SPINT1O43278 529 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TSPAN6O43657 245 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 PLRG1O43660 514 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 AP1G1O43747 822 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 LZTS3O60299 673 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 MMP20O60882 483 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 PAPSS2O95340 614 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 ELFN1P0C7U0 828 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3HP0C7X1 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 C7P10643 843 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 ZNF30P17039 623 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 PGAM1P18669 254 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 LPOP22079 712 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 OXTRP30559 389 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 MAGEA4P43358 317 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 LIG3P49916 1009 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 ADPRHP54922 357 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TAS2R38P59533 333 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TMPRSS15P98073 1019 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 RALGDSQ12967 914 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 MSLNQ13421 630 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 SLMAPQ14BN4 828 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 FASTKD3Q14CZ7 662 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 ACOX1Q15067 660 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 CNGA3Q16281 694 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 CDKN3Q16667 212 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TMEM52BQ4KMG9 183 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TSTD2Q5T7W7 516 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3GQ6DHY5 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3CQ6IPX1 549 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TSSK4Q6SA08 328 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 CES3Q6UWW8 571 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TMC3Q7Z5M5 1100 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 IGDCC3Q8IVU1 814 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 C1orf210Q8IVY1 113 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TBC1D3Q8IZP1 549 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 AGGF1Q8N302 714 aaeCLIP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TTC30BQ8N4P2 665 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 DTWD2Q8NBA8 298 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 PTCD2Q8WV60 388 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 RLN3Q8WXF3 142 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 C9orf72Q96LT7 481 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 RANBP9Q96S59 729 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 EBNA1BP2Q99848 306 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 KIFC1Q9BW19 673 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 PHACTR1Q9C0D0 580 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 SGK2Q9HBY8 427 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 BPIFA1Q9NP55 256 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 CHRAC1Q9NRG0 131 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 ZC3H7BQ9UGR2 993 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 SOX13Q9UN79 622 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 FNDC3AQ9Y2H6 1198 aaKnown RBP9.78□□□□□ -0.84
C9orf78-203ENST00000461539 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 TICRRQ7Z2Z1 1910 aa9.78□□□□□ -0.84
C9orf78-203ENST00000461539 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
C9orf78-203ENST00000461539 FAM237BA0A1B0GVD1 139 aa9.77□□□□□ -0.85
C9orf78-203ENST00000461539 LRRC72A6NJI9 287 aa9.77□□□□□ -0.85
C9orf78-203ENST00000461539 LDB2O43679 373 aa9.77□□□□□ -0.85
C9orf78-203ENST00000461539 RNGTTO60942 597 aaKnown RBP9.77□□□□□ -0.85
C9orf78-203ENST00000461539 ERLIN1O75477 346 aa9.77□□□□□ -0.85
C9orf78-203ENST00000461539 UQCRHP07919 91 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms