RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 TRAF2Q12933 501 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 DPYSL3Q14195 570 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 ISXQ2M1V0 245 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 KCTD16Q68DU8 428 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 LRRC69Q6ZNQ3 347 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 RD3Q7Z3Z2 195 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 GKN2Q86XP6 184 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 CBARPQ8N350 705 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 TEX26Q8N6G2 289 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 ARL10Q8N8L6 244 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 OR56A4Q8NGH8 313 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 PCDH19Q8TAB3 1148 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 WDR48Q8TAF3 677 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 PDXPQ96GD0 296 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 ZNF578Q96N58 590 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 KCTD5Q9NXV2 234 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 UVRAGQ9P2Y5 699 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 DOLKQ9UPQ8 538 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 BPTFQ12830 3046 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
SOX2-OT-201ENST00000460739 TNFRSF10CO14798 259 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 PGLSO95336 258 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 TNFP01375 233 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 MPOP05164 745 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 KELP23276 732 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 NFKBIAP25963 317 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ITPKBP27987 946 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 VIPR1P32241 457 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 GARSP41250 739 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 MAXP61244 160 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 GABREP78334 506 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 GALNT2Q10471 571 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ACOX1Q15067 660 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 PAFAH1B3Q15102 231 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CNGA3Q16281 694 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 SLC18A3Q16572 532 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ATP13A4Q4VNC1 1196 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ANKRD20A8PQ5CZ79 823 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 NCBP2-AS2Q69YL0 99 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 PNCKQ6P2M8 343 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 IGF2-ASQ6U949 168 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CRTC1Q6UUV9 634 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 RBM44Q6ZP01 1051 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CPNE8Q86YQ8 564 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 KYQ8NBH2 561 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CTNNBL1Q8WYA6 563 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 OR1E3Q8WZA6 343 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 FATE1Q969F0 183 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CRELD1Q96HD1 420 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCDC3Q9BQI4 270 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZNF670Q9BS34 389 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 LGR4Q9BXB1 951 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 FGF22Q9HCT0 170 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 GPR34Q9UPC5 381 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 PPIL1Q9Y3C6 166 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 ENTPD2Q9Y5L3 495 aa11.83□□□□□ -0.52
SOX2-OT-201ENST00000460739 PSMD11O00231 422 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 PDE2AO00408 941 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 NTN3O00634 580 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 MFSD11O43934 449 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 FZD6O60353 706 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 CYP2A6P11509 494 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 LHCGRP22888 699 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 ERVPABLB-1P60509 514 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 TRIM14Q14142 442 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 PDK2Q15119 407 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 TCEA2Q15560 299 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 ARMC12Q5T9G4 340 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 ALG1LQ6GMV1 187 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 PELI3Q8N2H9 469 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 KCTD6Q8NC69 237 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 GPR156Q8NFN8 814 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 OR6C4Q8NGE1 309 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 OR8K1Q8NGG5 319 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 MAML1Q92585 1016 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 FAF2Q96CS3 445 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 NUS1Q96E22 293 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 DTD2Q96FN9 168 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 ATXN7L3BQ96GX2 97 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 HIC2Q96JB3 615 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms