RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	RPS9	P46781	194 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	GNG11	P61952	73 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	SULT2A1	Q06520	285 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	POLD3	Q15054	466 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	E2F5	Q15329	346 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	CYP1B1	Q16678	543 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	GEN1	Q17RS7	908 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ANO4	Q32M45	955 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	FUT11	Q495W5	492 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	INO80D	Q53TQ3	878 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	DGKK	Q5KSL6	1271 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	TMCO4	Q5TGY1	634 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	NAIF1	Q69YI7	327 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	TMCO3	Q6UWJ1	677 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	RPTN	Q6XPR3	784 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZNF852	Q6ZMS4	543 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	BZW1	Q7L1Q6	419 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	SLC13A5	Q86YT5	568 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	MFN1	Q8IWA4	741 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	KLHDC8B	Q8IXV7	354 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	APCDD1	Q8J025	514 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	AHI1	Q8N157	1196 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	TEX26	Q8N6G2	289 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	DCAF4L2	Q8NA75	395 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	CCDC26	Q8TAB7	109 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	SLC35B2	Q8TB61	432 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	COG1	Q8WTW3	980 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	FRS2	Q8WU20	508 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	CASKIN2	Q8WXE0	1202 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	GATAD2B	Q8WXI9	593 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	FAM3C	Q92520	227 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	MAML1	Q92585	1016 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	NKD2	Q969F2	451 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	EXOC4	Q96A65	974 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ISG20	Q96AZ6	181 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	HDAC11	Q96DB2	347 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	TRIM44	Q96DX7	344 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	MRGPRX3	Q96LB0	322 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZNF599	Q96NL3	588 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	OSBPL9	Q96SU4	736 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	UHRF1	Q96T88	793 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	CALN1	Q9BXU9	219 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	SLC39A8	Q9C0K1	460 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	TMEM245	Q9H330	911 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	PDF	Q9HBH1	243 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	USP29	Q9HBJ7	922 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ARHGEF3	Q9NR81	526 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ABCB8	Q9NUT2	735 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	ELOVL2	Q9NXB9	296 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	PLK2	Q9NYY3	685 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	DTL	Q9NZJ0	730 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	DLGAP2	Q9P1A6	1054 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	THAP10	Q9P2Z0	257 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	AMACR	Q9UHK6	382 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	MUTYH	Q9UIF7	546 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	GGA2	Q9UJY4	613 aa		5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	PACSIN2	Q9UNF0	486 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-209	ENST00000460731	KNL1	Q8NG31	2342 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	GON4L	Q3T8J9	2241 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	TCRBV7S2A1N4T	A0A589	114 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	KANSL1L	A0AUZ9	987 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	BCLAF3	A2AJT9	711 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	CTAGE9	A4FU28	777 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ARHGAP42	A6NI28	874 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	HACD1	B0YJ81	288 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	C10orf142	B7Z368	130 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	RASA4B	C9J798	803 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731		H0Y626	953 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	KCNK3	O14649	394 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	MATN3	O15232	486 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	RASA4	O43374	803 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	CST8	O60676	142 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	RAMP2	O60895	175 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZNF189	O75820	626 aa	Predicted RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	UBOX5	O94941	541 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	HTR3B	O95264	441 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	PAPSS2	O95340	614 aa	Predicted RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ASL	P04424	464 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ATP5B	P06576	529 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	SRPRA	P08240	638 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	SYP	P08247	313 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	KRT10	P13645	584 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	HOXA6	P31267	233 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	SERPINB6	P35237	376 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	DEK	P35659	375 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ACVRL1	P37023	503 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	CETN2	P41208	172 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	CSK	P41240	450 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	GARS	P41250	739 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	SSR1	P43307	286 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	SOX9	P48436	509 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	CSNK1D	P48730	415 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	PAPOLA	P51003	745 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	CLCN5	P51795	746 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	MRPS21	P82921	87 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ARF5	P84085	180 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	ECT2L	Q008S8	904 aa		5.73	□□□□□ -1.49
PTPN12-209	ENST00000460731	GBE1	Q04446	702 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms