RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PRDM8Q9NQV8 689 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CHST12Q9NRB3 414 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 C1orf112Q9NSG2 853 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 RBM12Q9NTZ6 932 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 UCKL1Q9NWZ5 548 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ADAMTS1Q9UHI8 967 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 GLS2Q9UI32 602 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 SIX4Q9UIU6 781 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 HAO1Q9UJM8 370 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 NAGPAQ9UK23 515 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CHKBQ9Y259 395 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TRPV2Q9Y5S1 764 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TANC1Q9C0D5 1861 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TDRD15B5MCY1 1934 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ARHGEF37A1IGU5 675 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 MEI4A8MW99 385 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 H3BSA7 217 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PSMD11O00231 422 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF185O15231 689 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 MAN1A2O60476 641 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 SPAG7O75391 227 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CIB2O75838 187 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 KRT37O76014 449 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CST3P01034 146 aaPredicted RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CALB1P05937 261 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 NFICP08651 508 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 POU2F1P14859 743 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TGM1P22735 817 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 FDFT1P37268 417 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 SPAM1P38567 509 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 MAGEA1P43355 309 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PRIM2P49643 509 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 RAB4BP61018 213 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ARID5AQ03989 594 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 KRR1Q13601 381 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CUL2Q13617 745 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 RIN1Q13671 783 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PDE1CQ14123 709 aaPredicted RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 MORF4L2Q15014 288 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TCEAL1Q15170 157 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CLUL1Q15846 466 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ZBTB6Q15916 424 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 FBXO48Q5FWF7 155 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PXDC1Q5TGL8 231 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 JADE1Q6IE81 842 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ALKBH5Q6P6C2 394 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF767PQ75MW2 155 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 BBS7Q8IWZ6 715 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CCDC33Q8N5R6 958 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 FNDC5Q8NAU1 212 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 VANGL1Q8TAA9 524 aaPredicted RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 IFI44Q8TCB0 444 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 SLC26A7Q8TE54 656 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 KCTD4Q8WVF5 259 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 DDX1Q92499 740 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 NSL1Q96IY1 281 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ZC3H10Q96K80 434 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 C7orf34Q96L11 122 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 RUNDC3BQ96NL0 473 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 MCMBPQ9BTE3 642 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PI4K2AQ9BTU6 479 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 HEMGNQ9BXL5 484 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PACSIN1Q9BY11 444 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 C1orf21Q9H246 121 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM124BQ9H5Z6 455 aaPredicted RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 ELAC1Q9H777 363 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 NGRNQ9NPE2 291 aaKnown RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PAK6Q9NQU5 681 aaPredicted RBP6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PKD2L2Q9NZM6 624 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 TLK1Q9UKI8 766 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 PRELID3BQ9Y3B1 194 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 AUP1Q9Y679 476 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 CDY2AQ9Y6F7 541 aa6.87□□□□□ -1.31
CUBNP3-201ENST00000457461 NCANO14594 1321 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 A0A0A6YYK5 440 aaPredicted RBP6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 A0A0G2JPF8 293 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 HNRNPCL3B7ZW38 293 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 GYG2O15488 501 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 PGM3O95394 542 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 TNNC2P02585 160 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 TMEM191BP0C7N4 346 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 TRAPPC2P0DI81 140 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 TRAPPC2BP0DI82 140 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 HNRNPCL4P0DMR1 293 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 CYP11B1P15538 503 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF16P17020 682 aaPredicted RBP6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 CHRNB2P17787 502 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 RAB3AP20336 220 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 CHMP24386 653 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 DNAJB1P25685 340 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 RBL1P28749 1068 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 POLR2BP30876 1174 aaKnown RBP6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 BMXP51813 675 aa6.86□□□□□ -1.31
CUBNP3-201ENST00000457461 OSTNP61366 133 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms