RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CA4P22748 312 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 VIPR1P32241 457 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 RWDD2BP57060 319 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 RPL26P61254 145 aaKnown RBP17.4■□□□□ 0.38
USP39-208ENST00000455732 YPEL5P62699 121 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 NIPAL4Q0D2K0 466 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 FZD2Q14332 565 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 LRRC14Q15048 493 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 IRF4Q15306 451 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 WSCD2Q2TBF2 565 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 KAZNQ674X7 775 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 RNF10Q8N5U6 811 aaKnown RBP17.4■□□□□ 0.38
USP39-208ENST00000455732 EID2Q8N6I1 236 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 PIH1D2Q8WWB5 315 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 P3H4Q92791 437 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 SCRN2Q96FV2 425 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 TSGA10Q9BZW7 698 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 MBNL1Q9NR56 388 aaKnown RBP17.4■□□□□ 0.38
USP39-208ENST00000455732 RPL26L1Q9UNX3 145 aaKnown RBP17.4■□□□□ 0.38
USP39-208ENST00000455732 COQ6Q9Y2Z9 468 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 TTLL3Q9Y4R7 772 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 DMXL2Q8TDJ6 3036 aa17.4■□□□□ 0.38
USP39-208ENST00000455732 LRP4O75096 1905 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 ZZEF1O43149 2961 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 TMEM8BA6NDV4 472 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
USP39-208ENST00000455732 SDC3O75056 442 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 HEXIM1O94992 359 aaKnown RBP17.39■□□□□ 0.37
USP39-208ENST00000455732 MMP2P08253 660 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 CYP2A6P11509 494 aaPredicted RBP17.39■□□□□ 0.37
USP39-208ENST00000455732 GM2AP17900 193 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 SEMG2Q02383 582 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 SLC14A2Q15849 920 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 USP45Q70EL2 814 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 PEX26Q7Z412 305 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 PARGQ86W56 976 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 NDUFAF2Q8N183 169 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 SLC25A45Q8N413 288 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 TFB1MQ8WVM0 346 aaKnown RBP17.39■□□□□ 0.37
USP39-208ENST00000455732 ALG3Q92685 438 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 CNDP2Q96KP4 475 aaKnown RBP17.39■□□□□ 0.37
USP39-208ENST00000455732 CAAP1Q9H8G2 361 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 SAE1Q9UBE0 346 aaPredicted RBP17.39■□□□□ 0.37
USP39-208ENST00000455732 AMFRQ9UKV5 643 aa17.39■□□□□ 0.37
USP39-208ENST00000455732 NPIPB15A6NHN6 443 aaPredicted RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 GOLGA8CPA6NN73 597 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 MIF4GDA9UHW6 222 aaKnown RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 HACD1B0YJ81 288 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 APOC4-APOC2K7ER74 178 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 PSMD11O00231 422 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 ENC1O14682 589 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 MTSS1O43312 755 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 RECQL5O94762 991 aaPredicted RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 LDOC1O95751 146 aaPredicted RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 APOC2P02655 101 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 PDHA1P08559 390 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 NME1P15531 152 aaKnown RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 LHCGRP22888 699 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 DGKAP23743 735 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 SKOR1P84550 965 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 MTM1Q13496 603 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 PDE1CQ14123 709 aaPredicted RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 PTK2BQ14289 1009 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 LLGL1Q15334 1064 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 CNGA3Q16281 694 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 TEX44Q53QW1 395 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 TPRG1LQ5T0D9 272 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 KDM7AQ6ZMT4 941 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 TMPRSS7Q7RTY8 843 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 LRRC8AQ8IWT6 810 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 CBARPQ8N350 705 aaPredicted RBP17.38■□□□□ 0.37
USP39-208ENST00000455732 UBE2Q2Q8WVN8 375 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 TADA1Q96BN2 335 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 COQ10AQ96MF6 247 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 QKIQ96PU8 341 aaKnown RBP eCLIP17.38■□□□□ 0.37
USP39-208ENST00000455732 OSBPL8Q9BZF1 889 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 GRPEL1Q9HAV7 217 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 UCKL1Q9NWZ5 548 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 KCTD5Q9NXV2 234 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 DNPEPQ9ULA0 475 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 FAM208BQ5VWN6 2430 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 FREM2Q5SZK8 3169 aa17.38■□□□□ 0.37
USP39-208ENST00000455732 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 PIAS2O75928 621 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 PRLP01236 227 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 TRBC1P01850 177 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 CSF2P04141 144 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 GIMD1P0DJR0 217 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 PTPN3P26045 913 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 CETN2P41208 172 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 CD86P42081 329 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 HNRNPKP61978 463 aaKnown RBP eCLIP17.37■□□□□ 0.37
USP39-208ENST00000455732 DNAJC3Q13217 504 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 XRCC4Q13426 336 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 NOMO1Q15155 1222 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 CCNI2Q6ZMN8 369 aaPredicted RBP17.37■□□□□ 0.37
USP39-208ENST00000455732 MACC1Q6ZN28 852 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 ZNF662Q6ZS27 426 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 UBL4BQ8N7F7 174 aa17.37■□□□□ 0.37
USP39-208ENST00000455732 KDF1Q8NAX2 398 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms