RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 GPATCH2LQ9NWQ4 482 aa23.83■■□□□ 1.41
LYSMD2-202ENST00000454181 AP4E1Q9UPM8 1137 aa23.83■■□□□ 1.41
LYSMD2-202ENST00000454181 PRAMEF33A0A0G2JMD5 474 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 TCRBV5S1A1TA0A578 114 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 EIF3CLB5ME19 914 aaKnown RBP23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 DFFAO00273 331 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 TEX33O43247 280 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 NUDT21O43809 227 aaKnown RBP23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 PRAMEF10O60809 474 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 RGRP47804 291 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 COPB1P53618 953 aaKnown RBP23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 RALGDSQ12967 914 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 KCTD16Q68DU8 428 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 SPECC1LQ69YQ0 1117 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 ACAD10Q6JQN1 1059 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 EXD3Q8N9H8 876 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 EXTL1Q92935 676 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 USP7Q93009 1102 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 EIF3CQ99613 913 aaKnown RBP23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 FANCLQ9NW38 375 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 AHCTF1Q8WYP5 2266 aa23.82■■□□□ 1.4
LYSMD2-202ENST00000454181 A8MX80 341 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 SFTPCP11686 197 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 PSMA2P25787 234 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 SCNN1BP51168 640 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 RENBPP51606 427 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 UBXN1Q04323 297 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 NSUN2Q08J23 767 aaKnown RBP eCLIP23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 HLTFQ14527 1009 aaKnown RBP eCLIP23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 RFTN1Q14699 578 aaPredicted RBP23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 PPP1R15BQ5SWA1 713 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 AFMIDQ63HM1 303 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 DPPA4Q7L190 304 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 PIM3Q86V86 326 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 MCOLN2Q8IZK6 566 aa23.81■■□□□ 1.4
LYSMD2-202ENST00000454181 RHPN2P1A8MT19 583 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 CD82P27701 267 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 TRIM23P36406 574 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 LINC00303Q3SY05 128 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 PPP1R2P3Q6NXS1 205 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 PNCKQ6P2M8 343 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 ZFAND4Q86XD8 727 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 ECHDC3Q96DC8 303 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 SUDS3Q9H7L9 328 aaPredicted RBP23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 CARS2Q9HA77 564 aaKnown RBP23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 PARVAQ9NVD7 372 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 UNC13CQ8NB66 2214 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 MYO18BQ8IUG5 2567 aa23.8■■□□□ 1.4
LYSMD2-202ENST00000454181 A0A1W2PQC6 194 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 PRSS38A1L453 326 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 CPNE6O95741 557 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 FERP16591 822 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 CDK11BP21127 795 aaKnown RBP23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 TNFAIP3P21580 790 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 NFKBIAP25963 317 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 AP1S1P61966 158 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 SRSF6Q13247 344 aaKnown RBP23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 AMZ1Q400G9 498 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 ERMARDQ5T6L9 678 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 VASH2Q86V25 355 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 CCL4L1Q8NHW4 92 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 LGR4Q9BXB1 951 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 GSDMCQ9BYG8 508 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 PHPT1Q9NRX4 125 aaPredicted RBP23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 KCTD5Q9NXV2 234 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 SEPT3Q9UH03 358 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 PCSK1NQ9UHG2 260 aa23.79■■□□□ 1.4
LYSMD2-202ENST00000454181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 LGALS16A8MUM7 142 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 RNF8O76064 485 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 ERCC2P18074 760 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 ALDH4A1P30038 563 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 ETV5P41161 510 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 OGDHQ02218 1023 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 IL10RBQ08334 325 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 ILF3Q12906 894 aaKnown RBP eCLIP23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 PPP6R3Q5H9R7 873 aaPredicted RBP23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 RFX8Q6ZV50 586 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 SLITRK4Q8IW52 837 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 SFTPA2Q8IWL1 248 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 NUS1Q96E22 293 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 SEMA6CQ9H3T2 930 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 RDH14Q9HBH5 336 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 FOXJ2Q9P0K8 574 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 PCDHGA4Q9Y5G9 962 aa23.78■■□□□ 1.4
LYSMD2-202ENST00000454181 LRRK1Q38SD2 2015 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 A0A1W2PQ67 120 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 PRPSAP2O60256 369 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 MYCLP1P12525 358 aaPredicted RBP23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 CCNB1P14635 433 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 CSRP3P50461 194 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 B4GALNT1Q00973 533 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 PEX6Q13608 980 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 CA9Q16790 459 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 DENND2CQ68D51 928 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 ZDHHC1Q8WTX9 485 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 PDCD6IPQ8WUM4 868 aaKnown RBP23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 B4GALT6Q9UBX8 382 aa23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 LIMA1Q9UHB6 759 aaKnown RBP23.77■■□□□ 1.4
LYSMD2-202ENST00000454181 GOLGA6CA6NDK9 693 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms