RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCDHA10Q9Y5I2 948 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 U3KQV3 271 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZCCHC6Q5VYS8 1495 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 LOC102723996A0A087X1L8 192 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 A0A0A6YYK5 440 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 LOC100653049A0A140TA62 436 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 A0A1B0GWJ7 208 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CFAP73A6NFT4 308 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARHGAP42A6NI28 874 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 H0Y8G0 127 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCDC188H7C350 402 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PSMD9O00233 223 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLK4O00444 970 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLSCR1O15162 318 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PAPSS1O43252 624 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPRY1O43609 319 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 LIASO43766 372 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PAGE4O60829 102 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 IDH1O75874 414 aaKnown RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 KRT34O76011 436 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 MPIG6BO95866 241 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SERPING1P05155 500 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SBK3P0C264 359 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 RALAP11233 206 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PIM1P11309 404 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CYP2C9P11712 490 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCDC130P13994 396 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 AREGP15514 252 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TNFRSF1AP19438 455 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 NUP62P37198 522 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 MC3RP41968 323 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CRKLP46109 303 aaKnown RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 LIMS1P48059 325 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CLCNKAP51800 687 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF135P52742 658 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PNLIPRP2P54317 469 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TIRAPP58753 221 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SP2Q02086 613 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABRQ12979 859 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 BNIP1Q12981 228 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PPIGQ13427 754 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 KCNC3Q14003 757 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 UGP2Q16851 508 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PFKFB3Q16875 520 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ERCC6LQ2NKX8 1250 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF750Q32MQ0 723 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 LRIT3Q3SXY7 679 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 IFI44LQ53G44 452 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 NOMO2Q5JPE7 1267 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPATA46Q5T0L3 261 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARHGAP40Q5TG30 622 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TMEM81Q6P7N7 255 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 METAP1DQ6UB28 335 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 DGLUCYQ7Z3D6 616 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 USP37Q86T82 979 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SYVN1Q86TM6 617 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 AMZ2Q86W34 360 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 NUDT13Q86X67 352 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC22A9Q8IVM8 553 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 MFN1Q8IWA4 741 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCNYQ8ND76 341 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM46DQ8NEK8 389 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 DBF4BQ8NFT6 615 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 LILRB4Q8NHJ6 448 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 AKR7LQ8NHP1 331 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 EXOC6Q8TAG9 804 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC2A12Q8TD20 617 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CHURC1Q8WUH1 139 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PEX13Q92968 403 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 FBXO32Q969P5 355 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 NCLNQ969V3 563 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 DACT3Q96B18 629 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARRDC3Q96B67 414 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TMEM186Q96B77 213 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PHF21BQ96EK2 531 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 C19orf60Q96EN9 201 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCDC51Q96ER9 411 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 C11orf24Q96F05 449 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 DYDC2Q96IM9 177 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF560Q96MR9 790 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SSX3Q99909 188 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 EGFL8Q99944 293 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SOX7Q9BT81 388 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZSCAN5AQ9BUG6 496 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TBC1D10AQ9BXI6 508 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 RTN4RQ9BZR6 473 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCSER1Q9C0I3 900 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAB33BQ9H082 229 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TMEM117Q9H0C3 514 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAB17Q9H0T7 212 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 PNNQ9H307 717 aaKnown RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SERHL2Q9H4I8 314 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 BCAS3Q9H6U6 928 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 TMEM184CQ9NVA4 438 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 RLIMQ9NVW2 624 aa4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPATA6Q9NWH7 488 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P21-201ENST00000452483 IL1RAPL1Q9NZN1 696 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms