RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 ATP13A1Q9HD20 1204 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 LZTS1Q9Y250 596 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 ARHGAP10A1A4S6 786 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 UBXN8O00124 270 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 MGEA5O60502 916 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 FOXD2O60548 495 aaPredicted RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 MPOP05164 745 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 UQCRBP14927 111 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 SERPINH1P50454 418 aaKnown RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 RENBPP51606 427 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 NEDD8Q15843 81 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 TBCELQ5QJ74 424 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 DCLRE1AQ6PJP8 1040 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 SAPCD2Q86UD0 394 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 RALGPS2Q86X27 583 aaPredicted RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 SPPL2CQ8IUH8 684 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 CLEC4FQ8N1N0 589 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 ARHGAP18Q8N392 663 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 CLHC1Q8NHS4 586 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 ACOX2Q99424 681 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 TLR8Q9NR97 1041 aaKnown RBP11.21□□□□□ -0.61
DDR1-239ENST00000452441 GDAP2Q9NXN4 497 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 MOCS1Q9NZB8 636 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 TRHDEQ9UKU6 1024 aa11.21□□□□□ -0.61
DDR1-239ENST00000452441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.21□□□□□ -0.62
DDR1-239ENST00000452441 IQCF5A8MTL0 148 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 E9PAM4 449 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 GPR39O43194 453 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 ACRP10323 421 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 HGFP14210 728 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 ARRB2P32121 409 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.62
DDR1-239ENST00000452441 NPY2RP49146 381 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 ZNF177Q13360 481 aaPredicted RBP11.21□□□□□ -0.62
DDR1-239ENST00000452441 LRRC23Q53EV4 343 aaPredicted RBP11.21□□□□□ -0.62
DDR1-239ENST00000452441 PKN3Q6P5Z2 889 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 AAGABQ6PD74 315 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 ATG14Q6ZNE5 492 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 CUZD1Q86UP6 607 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 OFCC1Q8IZS5 231 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 ULK4Q96C45 1275 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 RTP4Q96DX8 246 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 DCUN1D1Q96GG9 259 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 SPATA17Q96L03 361 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.62
DDR1-239ENST00000452441 RHOJQ9H4E5 214 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 SOX17Q9H6I2 414 aaPredicted RBP11.21□□□□□ -0.62
DDR1-239ENST00000452441 ZFP14Q9HCL3 533 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 IRAK4Q9NWZ3 460 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 RAP2CQ9Y3L5 183 aa11.21□□□□□ -0.62
DDR1-239ENST00000452441 C15orf38-AP3S2A0A0A6YYH1 394 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 DPYSL4O14531 572 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 RHOCP08134 193 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 ACVRL1P37023 503 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 NFYCQ13952 458 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 ARMC12Q5T9G4 340 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 ARPINQ7Z6K5 226 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 ZFAND2BQ8WV99 257 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 EML4Q9HC35 981 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.2□□□□□ -0.623e-12■■■■□ 22.7
DDR1-239ENST00000452441 PNMA8BQ9ULN7 279 aaPredicted RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 CHEK2O96017 543 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 PPARGP37231 505 aaPredicted RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 ACLYP53396 1101 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 RPS24P62847 133 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 DYNC1I2Q13409 638 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 TUBB3Q13509 450 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 IMPG1Q17R60 797 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 ALFQ53S48 1182 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 CHST15Q7LFX5 561 aaPredicted RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 HS6ST3Q8IZP7 471 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 PQLC1Q8N2U9 271 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 LPGAT1Q92604 370 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 SORT1Q99523 831 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 MAF1Q9H063 256 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 GBA3Q9H227 469 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 MKS1Q9NXB0 559 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 U3KQV3 271 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 ENPP3O14638 875 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 STX7O15400 261 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 GSRP00390 522 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 HAPLN1P10915 354 aaPredicted RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 OXCT1P55809 520 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 LPIN1Q14693 890 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 SLC24A5Q71RS6 500 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 RBM23Q86U06 439 aaKnown RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 RNF217Q8TC41 542 aa11.2□□□□□ -0.62
DDR1-239ENST00000452441 MAGEE2Q8TD90 523 aaPredicted RBP11.2□□□□□ -0.62
DDR1-239ENST00000452441 SEPT8Q92599 483 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms