RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PGK1P00558 417 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ERBB2P04626 1255 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RB1P06400 928 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MBL2P11226 248 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PIM1P11309 404 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 SRCP12931 536 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MYL9P24844 172 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RFC4P35249 363 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RPL4P36578 427 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 HPCAL1P37235 193 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 IFNGR2P38484 337 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PTPN9P43378 593 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ALDH7A1P49419 539 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 RGS6P49758 472 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CTBP2P56545 445 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SMIM11AP58511 58 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RPS7P62081 194 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 SREBF2Q12772 1141 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ABRQ12979 859 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GK3PQ14409 553 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 USP10Q14694 798 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 SEC23AQ15436 765 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 VMACQ2NL98 169 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 WSCD2Q2TBF2 565 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PGS1Q32NB8 556 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LRRC24Q50LG9 513 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GLRA4Q5JXX5 417 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CDKL4Q5MAI5 379 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 HECTD3Q5T447 861 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 N4BP2L1Q5TBK1 243 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 GPR153Q6NV75 609 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SPOCD1Q6ZMY3 1216 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PTF1AQ7RTS3 328 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLFN11Q7Z7L1 901 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 IGFN1Q86VF2 1251 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DCP1BQ8IZD4 617 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 TMEM132CQ8N3T6 1108 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PLD5Q8N7P1 536 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 EFHBQ8N7U6 833 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM71DQ8N9W8 422 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PNMA1Q8ND90 353 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FEZF2Q8TBJ5 459 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 EEF1AKMT1Q8WVE0 214 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DEDD2Q8WXF8 326 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC47A1Q96FL8 570 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GMCL1Q96IK5 515 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PPP1R36Q96LQ0 422 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TBATAQ96M53 351 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM129BQ96TA1 746 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 EIF2AK1Q9BQI3 630 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 TMEM106CQ9BVX2 250 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CALN1Q9BXU9 219 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLITRK2Q9H156 845 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SEMA6AQ9H2E6 1030 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 REEP4Q9H6H4 257 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LRRC40Q9H9A6 602 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TCF7L1Q9HCS4 588 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PAQR5Q9NXK6 330 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 BARHL2Q9NY43 387 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GLTPQ9NZD2 209 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 H2AFY2Q9P0M6 372 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ARMCX1Q9P291 453 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC7A8Q9UHI5 535 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TRMT112Q9UI30 125 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ENPP5Q9UJA9 477 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 POLHQ9Y253 713 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PLLPQ9Y342 182 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MFHAS1Q9Y4C4 1052 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 HEY1Q9Y5J3 304 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FKBP7Q9Y680 259 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MYO5BQ9ULV0 1848 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KIF1AQ12756 1690 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ATRNO75882 1429 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CYP3A7-CYP3A51PA0A087WV96 503 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ATP6AP2A0A1C7CYW4 349 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 C2orf72A6NCS6 295 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM170BA6NMN3 283 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RHPN2P1A8MT19 583 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM220BPB1ANY3 271 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ERVV-2B6SEH9 535 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 H3BMQ9 156 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CHP2O43745 196 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 BANF1O75531 89 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SULT1C4O75897 302 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SNAPINO95295 136 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ERCC2P18074 760 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CYP3A7P24462 503 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PTBP1P26599 531 aaKnown RBP eCLIP2.21□□□□□ -2.062e-7■■■■■ 29.1
USP53-202ENST00000450251 CERS1P27544 350 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GNA15P30679 374 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 AKT1P31749 480 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MATKP42679 507 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GSTM5P46439 218 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LEPRP48357 1165 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 BCAR1P56945 870 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 PPP3R1P63098 170 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DYNLT1P63172 113 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CCNA1P78396 465 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FGL1Q08830 312 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ADAM15Q13444 863 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms