RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 POLEQ07864 2286 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 FAM237AA0A1B0GTK4 181 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 DRGXA6NNA5 263 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 XPAP23025 273 aaPredicted RBP12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 CMA1P23946 247 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 GPD2P43304 727 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 ITGA1P56199 1179 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 NME3Q13232 169 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 ADAM9Q13443 819 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 RAPGEF1Q13905 1077 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 POLD3Q15054 466 aaPredicted RBP12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 CHRNA6Q15825 494 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 SLC6A19Q695T7 634 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 ZNF783Q6ZMS7 281 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 HPS6Q86YV9 775 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 RHOT1Q8IXI2 618 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 DEFB106AQ8N104 65 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 CISD2Q8N5K1 135 aaKnown RBP12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 UBR7Q8N806 425 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 OR2AP1Q8NGE2 309 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 OR10G6Q8NH81 332 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 THAP4Q8WY91 577 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 FUBP1Q96AE4 644 aaKnown RBP12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 RANBP9Q96S59 729 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 LATS2Q9NRM7 1088 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 MPP6Q9NZW5 540 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 PCDHA7Q9UN72 937 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 PCDHGA6Q9Y5G7 932 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
AC004540.1-204ENST00000449537 NIPBLQ6KC79 2804 aaeCLIP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 ZSCAN5CA6NGD5 496 aaPredicted RBP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 POLR2DO15514 142 aaKnown RBP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 LRRTM2O43300 516 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 RHOBTB3O94955 611 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 CD160O95971 181 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 MBD3O95983 291 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 GSRP00390 522 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 CCNYL3P0C7X3 344 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 TBXAS1P24557 533 aaPredicted RBP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 CASP14P31944 242 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 SUOXP51687 545 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 RAD51Q06609 339 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 CDK18Q07002 472 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 ILF3Q12906 894 aaKnown RBP eCLIP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 CHAF1BQ13112 559 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 PEX6Q13608 980 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 AGERQ15109 404 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 TAF5Q15542 800 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 NFIL3Q16649 462 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 RBMXL3Q8N7X1 1067 aaKnown RBP12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 PLA2G15Q8NCC3 412 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 GALNT6Q8NCL4 622 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 PATE1Q8WXA2 126 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 STAMBPL1Q96FJ0 436 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 ING2Q9H160 280 aa12.61□□□□□ -0.39
AC004540.1-204ENST00000449537 ANKHD1Q8IWZ3 2542 aaKnown RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 PRSS38A1L453 326 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 PDE2AO00408 941 aaPredicted RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 KLRC4O43908 158 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 CALCAP01258 141 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 HOXC4P09017 264 aaPredicted RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 ZNF28P17035 718 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 PTGER4P35408 488 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 GNA12Q03113 381 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 LRMPQ12912 555 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 CPZQ66K79 652 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 WDR74Q6RFH5 385 aaPredicted RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 TMEM110Q86TL2 294 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 ZNF683Q8IZ20 524 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 NAGSQ8N159 534 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 STK32AQ8WU08 396 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 VOPP1Q96AW1 172 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 RNF31Q96EP0 1072 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 SUDS3Q9H7L9 328 aaPredicted RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 CARS2Q9HA77 564 aaKnown RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 PADI1Q9ULC6 663 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 G3BP2Q9UN86 482 aaKnown RBP12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 COQ4Q9Y3A0 265 aa12.6□□□□□ -0.39
AC004540.1-204ENST00000449537 ARGFXA6NJG6 315 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 E5RJQ4 531 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 ZG16O60844 167 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 AK4P27144 223 aaPredicted RBP12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 LIG3P49916 1009 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 GEMIN4P57678 1058 aaKnown RBP12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 FOXM1Q08050 763 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms