RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MRPL43Q8N983 215 aaKnown RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 TDRD5Q8NAT2 981 aaKnown RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 SPPL3Q8TCT6 385 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 AGR3Q8TD06 166 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 HEXDCQ8WVB3 486 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 SMIM14Q96QK8 99 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 OLFM1Q99784 485 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 EMILIN2Q9BXX0 1053 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 SLC46A2Q9BY10 475 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 ILKAPQ9H0C8 392 aaPredicted RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 MRPL46Q9H2W6 279 aaKnown RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 ARL5AQ9Y689 179 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 ANKRD36A6QL64 1941 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 CHD9Q3L8U1 2897 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 OR51F1A6NGY5 319 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 GFRA2O00451 464 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 DLX3O60479 287 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 LUC7L3O95232 432 aaKnown RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 IRS1P35568 1242 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 LAMB3Q13751 1172 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 WASHC2DQ5SRD0 308 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 LDB1Q86U70 411 aaPredicted RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 TMPRSS6Q8IU80 811 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 LMNTD2Q8IXW0 634 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 HJURPQ8NCD3 748 aaPredicted RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 BRSK1Q8TDC3 778 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 HERVK_113Q902F9 699 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 PEX13Q92968 403 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 TCEAL4Q96EI5 215 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 TBATAQ96M53 351 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 MRPL57Q9BQC6 102 aaKnown RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 MARCH4Q9P2E8 410 aaPredicted RBP16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 CLEC4EQ9ULY5 219 aa16.15■□□□□ 0.18
AP000253.1-201ENST00000449339 MYOFQ9NZM1 2061 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 SPECC1L-ADORA2AF8WAN1 911 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 LATS1O95835 1130 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 CSKP41240 450 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 CLCN4P51793 760 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 KPNA2P52292 529 aaKnown RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 ACVR1Q04771 509 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 FAM83EQ2M2I3 478 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 ARL13AQ5H913 290 aaPredicted RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 PPM1LQ5SGD2 360 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 EPGNQ6UW88 154 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 TPGS1Q6ZTW0 290 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 RBM15BQ8NDT2 890 aaKnown RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 FBXO27Q8NI29 283 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 TTC8Q8TAM2 541 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 TRIB3Q96RU7 358 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 FEM1AQ9BSK4 669 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 MCOLN1Q9GZU1 580 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 SUDS3Q9H7L9 328 aaPredicted RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 ASAH2Q9NR71 780 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 VPS28Q9UK41 221 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 RAP2CQ9Y3L5 183 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 TRAV19A0A0A6YYK7 116 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 LINC01553A4QN01 128 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 ZMPSTE24O75844 475 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 TMCC1O94876 653 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 S1PR4O95977 384 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 EZRP15311 586 aaKnown RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 CR2P20023 1033 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 CCR10P46092 362 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 SLC7A9P82251 487 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 CSHL1Q14406 222 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 SWT1Q5T5J6 900 aaKnown RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 HECTD2Q5U5R9 776 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 DDI1Q8WTU0 396 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 TSPAN17Q96FV3 270 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 DNAJC1Q96KC8 554 aaKnown RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 MMADHCQ9H3L0 296 aaPredicted RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 GPAMQ9HCL2 828 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 SCUBE2Q9NQ36 999 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 IGSF5Q9NSI5 407 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 LSM7Q9UK45 103 aaKnown RBP16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 CCL26Q9Y258 94 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 SH3BP1Q9Y3L3 701 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 IRAK3Q9Y616 596 aa16.14■□□□□ 0.17
AP000253.1-201ENST00000449339 INSIG1O15503 277 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 ENTPD5O75356 428 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 PIGNO95427 931 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 NDST3O95803 873 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 MPSTP25325 297 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 CDH18Q13634 790 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 RFTN1Q14699 578 aaPredicted RBP16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 SLC14A2Q15849 920 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 SLC9B1Q4ZJI4 515 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 WLSQ5T9L3 541 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 APCDD1Q8J025 514 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 OR13C4Q8NGS5 318 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 MAPK15Q8TD08 544 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 MAN1C1Q9NR34 630 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 VWA7Q9Y334 891 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 OR51B4Q9Y5P0 310 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 GRXCR1A8MXD5 290 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 LEFTY2O00292 366 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms