RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 GAS6Q14393 721 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 PTPRCAPQ14761 206 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 ERAP2Q6P179 960 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 KIAA1324Q6UXG2 1013 aaKnown RBP14.67□□□□□ -0.06
TNF-208ENST00000449264 ERN2Q76MJ5 926 aaKnown RBP14.67□□□□□ -0.06
TNF-208ENST00000449264 MREGQ8N565 214 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 AADATQ8N5Z0 425 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 HCAR2Q8TDS4 363 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 GANCQ8TET4 914 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 PTCD2Q8WV60 388 aaKnown RBP14.67□□□□□ -0.06
TNF-208ENST00000449264 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 SCRN2Q96FV2 425 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 MCCC1Q96RQ3 725 aaPredicted RBP14.67□□□□□ -0.06
TNF-208ENST00000449264 KIFC1Q9BW19 673 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 EPB41L4BQ9H329 900 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 MAGEE1Q9HCI5 957 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 CD248Q9HCU0 757 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 C2orf42Q9NWW7 574 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 IL1RAPL1Q9NZN1 696 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 SLC2A6Q9UGQ3 507 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 TECTAO75443 2155 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 MAGEB16A2A368 324 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 C2orf81A6NN90 581 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 CCL22O00626 93 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 RNASEH2AO75792 299 aaKnown RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 USP1O94782 785 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 CYP2A6P11509 494 aaPredicted RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 C5AR1P21730 350 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 LHCGRP22888 699 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 DRD3P35462 400 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 P2RY2P41231 377 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 SIGLEC14Q08ET2 396 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 CBLBQ13191 982 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 NUMA1Q14980 2115 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 TAF1AQ15573 450 aaPredicted RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 ANKRD20A4Q4UJ75 823 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 TSTD2Q5T7W7 516 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 C3orf62Q6ZUJ4 267 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 CCNJLQ8IV13 435 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 HDDC3Q8N4P3 179 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 OR13C4Q8NGS5 318 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 HMGB4Q8WW32 186 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 SIPA1Q96FS4 1042 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 DNAJC1Q96KC8 554 aaKnown RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 FCRL3Q96P31 734 aaPredicted RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 OMDQ99983 421 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 ZFYVE1Q9HBF4 777 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 PLAC1Q9HBJ0 212 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 MRM3Q9HC36 420 aaKnown RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 BPIFA1Q9NP55 256 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 SERGEFQ9UGK8 458 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 GGT7Q9UJ14 662 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 FNDC3AQ9Y2H6 1198 aaKnown RBP14.66□□□□□ -0.06
TNF-208ENST00000449264 LRRK1Q38SD2 2015 aa14.66□□□□□ -0.06
TNF-208ENST00000449264 MROH6A6NGR9 719 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 GOLGA8CPA6NN73 597 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 CHURC1-FNTBB4DL54 471 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 NEMP1O14524 444 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 DCXO43602 365 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ATG13O75143 517 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 CLDN7O95471 211 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 PDGFBP01127 241 aaPredicted RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 DCNP07585 359 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 NDUFV2P19404 249 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 VIPR1P32241 457 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 PHBP35232 272 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ZNF140P52738 457 aaPredicted RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 LAMB3Q13751 1172 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ARHGEF7Q14155 803 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 SLC29A2Q14542 456 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TTC31Q49AM3 519 aaPredicted RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 SPANXN3Q5MJ09 141 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 STEAP4Q687X5 459 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ESRP1Q6NXG1 681 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 CRTC1Q6UUV9 634 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 SYT13Q7L8C5 426 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TMEM135Q86UB9 458 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 UNC5BQ8IZJ1 945 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TTC30BQ8N4P2 665 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.65□□□□□ -0.06
TNF-208ENST00000449264 OR4K2Q8NGD2 314 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 PBXIP1Q96AQ6 731 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ZBTB9Q96C00 473 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 MRGPRX1Q96LB2 322 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 HHIPQ96QV1 700 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 LYSMD1Q96S90 227 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 HDAC8Q9BY41 377 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TRABDQ9H4I3 376 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 POLMQ9NP87 494 aaPredicted RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 PPANQ9NQ55 473 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 FBXL12Q9NXK8 326 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 BCCIPQ9P287 314 aaKnown RBP eCLIP14.65□□□□□ -0.06
TNF-208ENST00000449264 PPIL1Q9Y3C6 166 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 SIT1Q9Y3P8 196 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TCRBV9S1A1TA0A576 114 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 STX7O15400 261 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 SPAG6O75602 509 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms