RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SMAD2Q15796 467 aaKnown RBP24.95■■□□□ 1.58
RFFL-206ENST00000447669 PTCRAQ6ISU1 281 aaPredicted RBP24.95■■□□□ 1.58
RFFL-206ENST00000447669 MARK2Q7KZI7 788 aaKnown RBP24.95■■□□□ 1.58
RFFL-206ENST00000447669 CROCCP2Q86T23 111 aa24.95■■□□□ 1.58
RFFL-206ENST00000447669 TTC30BQ8N4P2 665 aa24.95■■□□□ 1.58
RFFL-206ENST00000447669 CDKL2Q92772 493 aa24.95■■□□□ 1.58
RFFL-206ENST00000447669 POLR3BQ9NW08 1133 aaPredicted RBP24.95■■□□□ 1.58
RFFL-206ENST00000447669 IL36AQ9UHA7 158 aa24.95■■□□□ 1.58
RFFL-206ENST00000447669 NPIPB15A6NHN6 443 aaPredicted RBP24.94■■□□□ 1.58
RFFL-206ENST00000447669 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.94■■□□□ 1.58
RFFL-206ENST00000447669 CLDN7O95471 211 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 PON2Q15165 354 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 TAF1AQ15573 450 aaPredicted RBP24.94■■□□□ 1.58
RFFL-206ENST00000447669 HNRNPA1L2Q32P51 320 aaKnown RBP24.94■■□□□ 1.58
RFFL-206ENST00000447669 PDPK2PQ6A1A2 396 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 KIAA0930Q6ICG6 404 aaPredicted RBP24.94■■□□□ 1.58
RFFL-206ENST00000447669 STRA8Q7Z7C7 330 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 TRABD2AQ86V40 505 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 C4orf33Q8N1A6 199 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 THAP10Q9P2Z0 257 aaPredicted RBP24.94■■□□□ 1.58
RFFL-206ENST00000447669 ZNF711Q9Y462 761 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 COL4A2P08572 1712 aa24.94■■□□□ 1.58
RFFL-206ENST00000447669 CRTAMO95727 393 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 NR1D1P20393 614 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 GABRB3P28472 473 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 TIE1P35590 1138 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 SPNS2Q8IVW8 549 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 PLPP6Q8IY26 295 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 RIBC1Q8N443 379 aaPredicted RBP24.93■■□□□ 1.58
RFFL-206ENST00000447669 SERAC1Q96JX3 654 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 MARCH4Q9P2E8 410 aaPredicted RBP24.93■■□□□ 1.58
RFFL-206ENST00000447669 PIAS3Q9Y6X2 628 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 CCDC162PA2VCL2 907 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 TRIM49D1C9J1S8 452 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 PLK4O00444 970 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 PAPSS2O95340 614 aaPredicted RBP24.93■■□□□ 1.58
RFFL-206ENST00000447669 EPHX1P07099 455 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 VASPP50552 380 aaPredicted RBP24.93■■□□□ 1.58
RFFL-206ENST00000447669 PGGT1BP53609 377 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 FRG1Q14331 258 aaKnown RBP24.93■■□□□ 1.58
RFFL-206ENST00000447669 ACVR1CQ8NER5 493 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 MDM1Q8TC05 714 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 GPR63Q9BZJ6 419 aa24.93■■□□□ 1.58
RFFL-206ENST00000447669 C1orf232A0A0U1RR37 186 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 GPR39O43194 453 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 GOT2P00505 430 aaKnown RBP24.92■■□□□ 1.58
RFFL-206ENST00000447669 SLC1A2P43004 574 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 PRAMEP78395 509 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 CDKN3Q16667 212 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 ZNF789Q5FWF6 425 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 HABP4Q5JVS0 413 aaKnown RBP24.92■■□□□ 1.58
RFFL-206ENST00000447669 ZNF470Q6ECI4 717 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 STYXQ8WUJ0 223 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 UCMAQ8WVF2 138 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 CDKN2AIPNLQ96HQ2 116 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 ZNF641Q96N77 438 aaPredicted RBP24.92■■□□□ 1.58
RFFL-206ENST00000447669 MAGEE1Q9HCI5 957 aa24.92■■□□□ 1.58
RFFL-206ENST00000447669 C2orf81A6NN90 581 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 SPAG7O75391 227 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 EGFP01133 1207 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 PAMP19021 973 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 CD72P21854 359 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 THOC5Q13769 683 aaKnown RBP24.91■■□□□ 1.58
RFFL-206ENST00000447669 C2orf27AQ580R0 203 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 NEPROQ6NW34 567 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 CACUL1Q86Y37 369 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 ZNF513Q8N8E2 541 aaPredicted RBP24.91■■□□□ 1.58
RFFL-206ENST00000447669 FAM76AQ8TAV0 307 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 PPCSQ9HAB8 311 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 NLE1Q9NVX2 485 aaPredicted RBP24.91■■□□□ 1.58
RFFL-206ENST00000447669 FKBPLQ9UIM3 349 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 AHSGP02765 367 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 LPOP22079 712 aaPredicted RBP24.91■■□□□ 1.58
RFFL-206ENST00000447669 GMPRP36959 345 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 CDKN1CP49918 316 aaPredicted RBP24.91■■□□□ 1.58
RFFL-206ENST00000447669 ACVR1Q04771 509 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 SEMA3AQ14563 771 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 RASA2Q15283 850 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 TTC19Q6DKK2 380 aaPredicted RBP24.91■■□□□ 1.58
RFFL-206ENST00000447669 CHPFQ8IZ52 775 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 PLCD3Q8N3E9 789 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 OTUD6BQ8N6M0 293 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 FAM129BQ96TA1 746 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 SELENOSQ9BQE4 189 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 TRABDQ9H4I3 376 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 ZNF180Q9UJW8 692 aa24.91■■□□□ 1.58
RFFL-206ENST00000447669 EDDM13A0A1B0GTR0 161 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 KPNA3O00505 521 aaPredicted RBP24.9■■□□□ 1.58
RFFL-206ENST00000447669 RPP40O75818 363 aaKnown RBP24.9■■□□□ 1.58
RFFL-206ENST00000447669 LEXMQ3ZCV2 418 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 CRTC1Q6UUV9 634 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 NLRP9Q7RTR0 991 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 FAM96AQ9H5X1 160 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 PRSS16Q9NQE7 514 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 FBXO6Q9NRD1 293 aaPredicted RBP24.9■■□□□ 1.58
RFFL-206ENST00000447669 PHTF1Q9UMS5 762 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 STON1Q9Y6Q2 735 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 IQANK1A0A1B0GTG1 560 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 CAPN8A6NHC0 703 aa24.9■■□□□ 1.58
RFFL-206ENST00000447669 KRT4P19013 534 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms