RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 OXTRP30559 389 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 MAGEA3P43357 314 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TAS2R38P59533 333 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 PDIA2Q13087 525 aaKnown RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 PCID2Q5JVF3 399 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 HP1BP3Q5SSJ5 553 aaPredicted RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3GQ6DHY5 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3CQ6IPX1 549 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 CENPUQ71F23 418 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 DPPA4Q7L190 304 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 LYSMD3Q7Z3D4 306 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 GLT6D1Q7Z4J2 308 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 TBC1D3Q8IZP1 549 aaPredicted RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 MPP5Q8N3R9 675 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 RUBCNQ92622 972 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 WRAP53Q9BUR4 548 aaKnown RBP17.45■□□□□ 0.38
SGCE-206ENST00000445866 ZFYVE1Q9HBF4 777 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 SGK2Q9HBY8 427 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.45■□□□□ 0.38
SGCE-206ENST00000445866 GGT7Q9UJ14 662 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 INVSQ9Y283 1065 aa17.45■□□□□ 0.38
SGCE-206ENST00000445866 KIAA1549LQ6ZVL6 1849 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 PRR23AA6NEV1 266 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 BUD23O43709 281 aaKnown RBP17.44■□□□□ 0.38
SGCE-206ENST00000445866 MMP20O60882 483 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 BANF1O75531 89 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 SLC4A1P02730 911 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 MCM3P25205 808 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 HOXA6P31267 233 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 ACSL1P33121 698 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 MMP12P39900 470 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 LIG3P49916 1009 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 PTSQ03393 145 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 DHX9Q08211 1270 aaKnown RBP17.44■□□□□ 0.38
SGCE-206ENST00000445866 DMWDQ09019 674 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 TAF1AQ15573 450 aaPredicted RBP17.44■□□□□ 0.38
SGCE-206ENST00000445866 CDKN3Q16667 212 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 TMEM52BQ4KMG9 183 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 USP39Q53GS9 565 aaKnown RBP17.44■□□□□ 0.38
SGCE-206ENST00000445866 LRRC66Q68CR7 880 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 EIF1ADQ8N9N8 165 aaKnown RBP17.44■□□□□ 0.38
SGCE-206ENST00000445866 CXorf40AQ8TE69 158 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 TOE1Q96GM8 510 aaKnown RBP17.44■□□□□ 0.38
SGCE-206ENST00000445866 SIGLEC10Q96LC7 697 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 FMO2Q99518 471 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 TSPYL1Q9H0U9 437 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 CHRAC1Q9NRG0 131 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 SYBUQ9NX95 663 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 SAMD15Q9P1V8 674 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 ZNF711Q9Y462 761 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 KCTD3Q9Y597 815 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
SGCE-206ENST00000445866 TECTAO75443 2155 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 SPINT1O43278 529 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 PLRG1O43660 514 aaKnown RBP17.43■□□□□ 0.38
SGCE-206ENST00000445866 ECHS1P30084 290 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 ADPRHP54922 357 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 VSNL1P62760 191 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 LAMB3Q13751 1172 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 LIPIQ6XZB0 460 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 PPHLN1Q8NEY8 458 aaKnown RBP17.43■□□□□ 0.38
SGCE-206ENST00000445866 MYRIPQ8NFW9 859 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 FAM131CQ96AQ9 280 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 KDM4CQ9H3R0 1056 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 SAYSD1Q9NPB0 183 aa17.43■□□□□ 0.38
SGCE-206ENST00000445866 PRMT8Q9NR22 394 aaPredicted RBP17.43■□□□□ 0.38
SGCE-206ENST00000445866 HEATR9A2RTY3 570 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 LRRC72A6NJI9 287 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 STX7O15400 261 aaKnown RBP17.42■□□□□ 0.38
SGCE-206ENST00000445866 IGLV3-19P01714 112 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 TUBBP07437 444 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 ELFN1P0C7U0 828 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 LPOP22079 712 aaPredicted RBP17.42■□□□□ 0.38
SGCE-206ENST00000445866 LHCGRP22888 699 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 CD6P30203 668 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 FNTBP49356 437 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 PDE1BQ01064 536 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 ELF2Q15723 593 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 WDR93Q6P2C0 686 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 TMC3Q7Z5M5 1100 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 ANKMY2Q8IV38 441 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 ZBED8Q8IZ13 594 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 MAML2Q8IZL2 1156 aaPredicted RBP17.42■□□□□ 0.38
SGCE-206ENST00000445866 AGGF1Q8N302 714 aaeCLIP17.42■□□□□ 0.38
SGCE-206ENST00000445866 TTC30BQ8N4P2 665 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 FAM160A2Q8N612 972 aaPredicted RBP17.42■□□□□ 0.38
SGCE-206ENST00000445866 FRMD1Q8N878 549 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 STAMBPL1Q96FJ0 436 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 BPIFA1Q9NP55 256 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 C11orf16Q9NQ32 467 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 WSB2Q9NYS7 404 aaPredicted RBP17.42■□□□□ 0.38
SGCE-206ENST00000445866 TCAF1Q9Y4C2 921 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 CCDC78A2IDD5 438 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 IGLON5A6NGN9 336 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 EIF3HO15372 352 aaKnown RBP eCLIP17.42■□□□□ 0.38
SGCE-206ENST00000445866 LDB2O43679 373 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 LZTS3O60299 673 aaPredicted RBP17.42■□□□□ 0.38
SGCE-206ENST00000445866 GPR37L1O60883 481 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 MYBL2P10244 700 aa17.42■□□□□ 0.38
SGCE-206ENST00000445866 ZNF30P17039 623 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms