RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 HEXIM1O94992 359 aaKnown RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 NDST3O95803 873 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 ITGAVP06756 1048 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 LHCGRP22888 699 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 PSMB4P28070 264 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 TNNT3P45378 269 aaPredicted RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 ATXN3P54252 364 aaPredicted RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 GEMP55040 296 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 GDF10P55107 478 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 BNC1Q01954 994 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 LMNB2Q03252 620 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 GRIK2Q13002 908 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 MPP3Q13368 585 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 LRRC14Q15048 493 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 ACOX1Q15067 660 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 CNGA3Q16281 694 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 PARP6Q2NL67 630 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 KIF19Q2TAC6 998 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 DRICH1Q6PGQ1 229 aaPredicted RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 CRTC1Q6UUV9 634 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 IQCHQ86VS3 1027 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 CBARPQ8N350 705 aaPredicted RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 TMEM145Q8NBT3 493 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 RTP4Q96DX8 246 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 KLHDC7BQ96G42 594 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 KLF6Q99612 283 aaPredicted RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 ZDHHC5Q9C0B5 715 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 DRG1Q9Y295 367 aaKnown RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 AAR2Q9Y312 384 aaKnown RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 SNX11Q9Y5W9 270 aa12.36□□□□□ -0.43
USP1-203ENST00000442679 TNRC6BQ9UPQ9 1833 aaKnown RBP12.36□□□□□ -0.43
USP1-203ENST00000442679 CEP192Q8TEP8 1941 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 EP300Q09472 2414 aaPredicted RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 A0A0U1RQS6 177 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 LOC285095A0A1B0GVY8 99 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 CTAGE9A4FU28 777 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 POM121BA6NF01 834 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 H0Y8X5 98 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 ZNF185O15231 689 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 IFNB1P01574 187 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 EPOP01588 193 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 THEGLP0DJG4 465 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 ARHGAP8P85298 464 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 OVGP1Q12889 678 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 AGERQ15109 404 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 WSCD2Q2TBF2 565 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 P3H1Q32P28 736 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 PAPD7Q5XG87 772 aaKnown RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 LRRC66Q68CR7 880 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 IL27RAQ6UWB1 636 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 GCNT7Q6ZNI0 430 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 Q6ZSR6 202 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 HSD11B1LQ7Z5J1 315 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 ABI3BPQ7Z7G0 1075 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 SLC25A41Q8N5S1 370 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 DENND6BQ8NEG7 585 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 OR13H1Q8NG92 308 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 FAM174AQ8TBP5 190 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 BMFQ96LC9 184 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 COQ10AQ96MF6 247 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 PPP1R2P1Q96PQ5 205 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 GORASP1Q9BQQ3 440 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 AP1M1Q9BXS5 423 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 TMEM9BQ9NQ34 198 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 MBNL1Q9NR56 388 aaKnown RBP12.35□□□□□ -0.43
USP1-203ENST00000442679 SMARCAL1Q9NZC9 954 aa12.35□□□□□ -0.43
USP1-203ENST00000442679 A6NNZ2 444 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 PSMD11O00231 422 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 MAGEC1O60732 1142 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 CLDN7O95471 211 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 METTL18O95568 372 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 AGTP01019 485 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
USP1-203ENST00000442679 PIRTP0C851 137 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 ZNF30P17039 623 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 GM2AP17900 193 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 ACTN2P35609 894 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 ETV3P41162 512 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 CTSKP43235 329 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 KCNJ1P48048 391 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 NXPH1P58417 271 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 PTSQ03393 145 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 IRF4Q15306 451 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 HLA-BQ31612 363 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 SIRPB2Q5JXA9 342 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
USP1-203ENST00000442679 KYAT3Q6YP21 454 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms