RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 LIPIQ6XZB0 460 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 ARHGAP36Q6ZRI8 547 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 ARFGAP1Q8N6T3 406 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 ECHDC3Q96DC8 303 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 NUS1Q96E22 293 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 PDXPQ96GD0 296 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 TMEM74Q96NL1 305 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 RBM15Q96T37 977 aaKnown RBP eCLIP11.82□□□□□ -0.52
TTC28-203ENST00000442232 TRIM7Q9C029 511 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 PHPT1Q9NRX4 125 aaPredicted RBP11.82□□□□□ -0.52
TTC28-203ENST00000442232 DGKBQ9Y6T7 804 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 BPTFQ12830 3046 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 GOLGA6BA6NDN3 693 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 A8MX80 341 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 D6RAR5 112 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 GOLGA6L19H0YKK7 550 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 TNFRSF10CO14798 259 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 ZW10O43264 779 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 TNFSF15O95150 251 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 HOXC4P09017 264 aaPredicted RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 VIPR1P32241 457 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 INHBCP55103 352 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 CDH6P55285 790 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 RHDQ02161 417 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 RALGDSQ12967 914 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 EIF3IQ13347 325 aaKnown RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 BIRC2Q13490 618 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 ARHGEF7Q14155 803 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 FIGNQ5HY92 759 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 DENND2CQ68D51 928 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 CYP4V2Q6ZWL3 525 aaPredicted RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 USP45Q70EL2 814 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 JAMLQ86YT9 394 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 CCNJLQ8IV13 435 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 NDUFAF2Q8N183 169 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 PLA2G15Q8NCC3 412 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 FAM46DQ8NEK8 389 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 KIAA1524Q8TCG1 905 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 FUBP1Q96AE4 644 aaKnown RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 IQCDQ96DY2 449 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 LIN37Q96GY3 246 aaPredicted RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 NAP1L5Q96NT1 182 aaPredicted RBP11.81□□□□□ -0.52
TTC28-203ENST00000442232 SLC46A1Q96NT5 459 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 NUDCD1Q96RS6 583 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 ISCUQ9H1K1 167 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 CYP4F12Q9HCS2 524 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 B4GALT6Q9UBX8 382 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 IP6K2Q9UHH9 426 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 ANAPC7Q9UJX3 599 aa11.81□□□□□ -0.52
TTC28-203ENST00000442232 A0A1W2PQJ5 194 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 PRSS38A1L453 326 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 TMEM202A6NGA9 273 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 CAPN8A6NHC0 703 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 B4DGG1 531 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 ERVH48-1M5A8F1 160 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 NTN3O00634 580 aaPredicted RBP11.8□□□□□ -0.52
TTC28-203ENST00000442232 TRAFD1O14545 582 aaPredicted RBP11.8□□□□□ -0.52
TTC28-203ENST00000442232 SERPING1P05155 500 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 ITGA2BP08514 1039 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 JMJD7P0C870 316 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 MYCLP1P12525 358 aaPredicted RBP11.8□□□□□ -0.52
TTC28-203ENST00000442232 AMPD1P23109 780 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 MMP13P45452 471 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 SLC10A7Q0GE19 358 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 PEX6Q13608 980 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 HADHQ16836 314 aaKnown RBP11.8□□□□□ -0.52
TTC28-203ENST00000442232 ARMC12Q5T9G4 340 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 ARHGAP40Q5TG30 622 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 MARC1Q5VT66 337 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 PNCKQ6P2M8 343 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 RAB11FIP2Q7L804 512 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 POLNQ7Z5Q5 900 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 FBXO39Q8N4B4 442 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 TEKT4Q8WW24 435 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 NUP85Q9BW27 656 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 LRRN3Q9H3W5 708 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 DPEP2Q9H4A9 486 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 SUDS3Q9H7L9 328 aaPredicted RBP11.8□□□□□ -0.52
TTC28-203ENST00000442232 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 PHTF1Q9UMS5 762 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 UNC13CQ8NB66 2214 aa11.8□□□□□ -0.52
TTC28-203ENST00000442232 SMG1Q96Q15 3661 aaKnown RBP11.8□□□□□ -0.52
TTC28-203ENST00000442232 LOC400499M0QZD8 3231 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 ARHGEF17Q96PE2 2063 aaPredicted RBP11.79□□□□□ -0.52
TTC28-203ENST00000442232 PSMD11O00231 422 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 PLD2O14939 933 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 PRB1P04280 392 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 RARAP10276 462 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 PNLIPP16233 465 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 GLB1P16278 677 aa11.79□□□□□ -0.52
TTC28-203ENST00000442232 CA4P22748 312 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms