RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MMP17Q9ULZ9 603 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 CACNA1IQ9P0X4 2223 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 A0A1W2PP55 124 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 F5H423 210 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 DCLK1O15075 740 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SDHBP21912 280 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 HTR1BP28222 390 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SERPINA4P29622 427 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 CNR2P34972 360 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 TNFRSF4P43489 277 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 POLR2LP62875 67 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 GNA12Q03113 381 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF234Q14588 700 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 GEN1Q17RS7 908 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 KBTBD12Q3ZCT8 623 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 PITRM1Q5JRX3 1037 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM182AQ5T1J6 154 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 IER5LQ5T953 404 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 DARS2Q6PI48 645 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 Q6ZVU0 165 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 PID1Q7Z2X4 250 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 PTAR1Q7Z6K3 402 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 RABEPKQ7Z6M1 372 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 ALKBH8Q96BT7 664 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 TOE1Q96GM8 510 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SMC6Q96SB8 1091 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 FSD1LQ9BXM9 530 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 MANSC1Q9H8J5 431 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SCUBE2Q9NQ36 999 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBXO6Q9NRD1 293 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM8A1Q9UBU6 413 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 EIF2B4Q9UI10 523 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLCO3A1Q9UIG8 710 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF148Q9UQR1 794 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 MKI67P46013 3256 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 BCLAF3A2AJT9 711 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 C19orf67A6NJJ6 358 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SGK1O00141 431 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MCF2LO15068 1137 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 CST8O60676 142 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 HNRNPCL1O60812 293 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 AVILO75366 819 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ALOX15P16050 662 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ELK3P41970 407 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAGEA12P43365 314 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF143P52747 638 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 RING1Q06587 406 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 LMAN2Q12907 356 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC10A2Q12908 348 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MMRN1Q13201 1228 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC12A1Q13621 1099 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACOX1Q15067 660 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PIK3R6Q5UE93 754 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MARC1Q5VT66 337 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ISL2Q96A47 359 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 RAB3IPQ96QF0 476 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 HPS4Q9NQG7 708 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBXO4Q9UKT5 387 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SSUH2Q9Y2M2 353 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PLLPQ9Y342 182 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PTPRDP23468 1912 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 EIF4E1BA6NMX2 242 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 POC1B-GALNT4F8VUJ3 575 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PPP1R12AO14974 1030 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 UGT1A9O60656 530 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZFXP17010 805 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 STARD6P59095 220 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PCSK7Q16549 785 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 CCDC14Q49A88 953 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 OLFML1Q6UWY5 402 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 METTL3Q86U44 580 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MYLK4Q86YV6 388 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 STK40Q8N2I9 435 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 DCLK2Q8N568 766 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 DNAAF3Q8N9W5 541 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 IL12RB2Q99665 862 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 HEPHQ9BQS7 1158 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 CCDC77Q9BR77 488 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 UGT1A7Q9HAW7 530 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 UGT1A10Q9HAW8 530 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 UGT1A8Q9HAW9 530 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 NPHS2Q9NP85 383 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 NT5MQ9NPB1 228 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 NMRK1Q9NWW6 199 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 GULP1Q9UBP9 304 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SEPT3Q9UH03 358 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 NLRC5Q86WI3 1866 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 DPPA5A6NC42 116 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 NDC80O14777 642 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SNAP91O60641 907 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SEMA4FO95754 770 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 CAPNS1P04632 268 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SP9P0CG40 484 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 AKT2P31751 481 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 EIF2DP41214 584 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 DPP6P42658 865 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 RENBPP51606 427 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ATXN1P54253 815 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MLLT6P55198 1093 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms