RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SMYD1Q8NB12 490 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 OR14C36Q8NHC7 312 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SCAMP5Q8TAC9 235 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 WDR48Q8TAF3 677 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 WFIKKN2Q8TEU8 576 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 CYB5D2Q8WUJ1 264 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ARHGEF2Q92974 986 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ART4Q93070 314 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF653Q96CK0 615 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 KLHDC7BQ96G42 594 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 HPDLQ96IR7 371 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 PIWIL1Q96J94 861 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 FAM84AQ96KN4 292 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 RMDN2Q96LZ7 410 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 AGAP3Q96P47 875 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 CATSPER2Q96P56 530 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 FAM213AQ9BRX8 229 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 KLF16Q9BXK1 252 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 STRADBQ9C0K7 418 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SNX25Q9H3E2 840 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 DENND2DQ9H6A0 471 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 SYNCQ9H7C4 482 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 PCDH18Q9HCL0 1135 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 PRSS16Q9NQE7 514 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 TLR8Q9NR97 1041 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 TBCCD1Q9NVR7 557 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 UCKL1Q9NWZ5 548 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 GRHL1Q9NZI5 618 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 NCKIPSDQ9NZQ3 722 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 LGALS13Q9UHV8 139 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 G3BP2Q9UN86 482 aaKnown RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 PACSIN2Q9UNF0 486 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF148Q9UQR1 794 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 NME7Q9Y5B8 376 aa6.55□□□□□ -1.36
HDAC6-210ENST00000441703 UBE4BO95155 1302 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 MED13Q9UHV7 2174 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 COL27A1Q8IZC6 1860 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3DA0A087WVF3 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3IA0A087WXS9 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3EA0A087X179 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3KA0A087X1G2 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3FA6NER0 549 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 A8MXQ7 604 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3LB9A6J9 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 F8W8V4 182 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TMX2-CTNND1H3BSU7 103 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SMAPO00193 183 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 MID1O15344 667 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 BIRC5O15392 142 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SEMA7AO75326 666 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PIAS2O75928 621 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ECEL1O95672 775 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBX18O95935 607 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 LDHAP00338 332 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 KRT18P05783 430 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3HP0C7X1 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ZFXP17010 805 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 UGT1A5P35504 534 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 NUDT1P36639 197 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SERPINB8P50452 374 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SCNN1BP51168 640 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PLTPP55058 493 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 RAB15P59190 212 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 POLR2FP61218 127 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 FKBP3Q00688 224 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ADRM1Q16186 407 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3GQ6DHY5 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3CQ6IPX1 549 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 GUSBP11Q6P575 273 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 KLC3Q6P597 504 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 KLHDC10Q6PID8 442 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 LRRC74BQ6ZQY2 392 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 CEP128Q6ZU80 1094 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 CHST9Q7L1S5 443 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 IRF2BP2Q7Z5L9 587 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ZC3H3Q8IXZ2 948 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TBC1D3Q8IZP1 549 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TEX19Q8NA77 164 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 B3GALNT2Q8NCR0 500 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 KIAA0895Q8NCT3 520 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 DDI1Q8WTU0 396 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 P2RY11Q96G91 374 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 POM121Q96HA1 1249 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 ANKRD36BP1Q96IX9 119 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 HEXIM2Q96MH2 286 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 LRRC37BQ96QE4 947 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PLIN2Q99541 437 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
HDAC6-210ENST00000441703 TRIM51Q9BSJ1 452 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 MED10Q9BTT4 135 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 B3GNT5Q9BYG0 378 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 SLC2A11Q9BYW1 496 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 PITPNM3Q9BZ71 974 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 GANQ9H2C0 597 aa6.54□□□□□ -1.36
HDAC6-210ENST00000441703 IKZF4Q9H2S9 585 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms