RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PCDHB1Q9Y5F3 818 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 DGKBQ9Y6T7 804 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 TNFRSF10CO14798 259 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 TGM2P21980 687 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 CES1P23141 567 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 HNRNPH3P31942 346 aaKnown RBP18.86■□□□□ 0.61
CCDC78-204ENST00000439619 VIPR1P32241 457 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 GJC1P36383 396 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 LSSP48449 732 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 SLC18A3Q16572 532 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 ISXQ2M1V0 245 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 ARMC12Q5T9G4 340 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 USP45Q70EL2 814 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 NUS1Q96E22 293 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 POLR1EQ9GZS1 481 aaKnown RBP18.86■□□□□ 0.61
CCDC78-204ENST00000439619 SYNDIG1Q9H7V2 258 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 POLR1BQ9H9Y6 1135 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 NOD2Q9HC29 1040 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 MOSPD1Q9UJG1 213 aa18.86■□□□□ 0.61
CCDC78-204ENST00000439619 PNMA8BQ9ULN7 279 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-204ENST00000439619 DOCK9Q9BZ29 2069 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 AKR1B10O60218 316 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PROSCO94903 275 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PEX11BO96011 259 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 MPOP05164 745 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 CR2P20023 1033 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 MX2P20592 715 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 CA4P22748 312 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 RBMS1P29558 406 aaKnown RBP18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PCBP4P57723 403 aaKnown RBP18.85■□□□□ 0.61
CCDC78-204ENST00000439619 MAXP61244 160 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 SPIDRQ14159 915 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PNCKQ6P2M8 343 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 TAF8Q7Z7C8 310 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PLA2G15Q8NCC3 412 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 ZNF248Q8NDW4 579 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PCDH19Q8TAB3 1148 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 FAM71BQ8TC56 605 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 FUBP1Q96AE4 644 aaKnown RBP18.85■□□□□ 0.61
CCDC78-204ENST00000439619 ZNF830Q96NB3 372 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-204ENST00000439619 RBM15Q96T37 977 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCDC78-204ENST00000439619 CCDC3Q9BQI4 270 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 ZNF670Q9BS34 389 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 NT5MQ9NPB1 228 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 PHPT1Q9NRX4 125 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-204ENST00000439619 THSD1Q9NS62 852 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 SIRPGQ9P1W8 387 aa18.85■□□□□ 0.61
CCDC78-204ENST00000439619 TTC24A2A3L6 582 aaPredicted RBP18.84■□□□□ 0.61
CCDC78-204ENST00000439619 PSMD11O00231 422 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 TLX3O43711 291 aaPredicted RBP18.84■□□□□ 0.61
CCDC78-204ENST00000439619 HEXIM1O94992 359 aaKnown RBP18.84■□□□□ 0.61
CCDC78-204ENST00000439619 TRIM23P36406 574 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 GARSP41250 739 aaKnown RBP18.84■□□□□ 0.61
CCDC78-204ENST00000439619 ERVPABLB-1P60509 514 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 MMRN1Q13201 1228 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 PAFAH1B3Q15102 231 aaKnown RBP18.84■□□□□ 0.61
CCDC78-204ENST00000439619 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
CCDC78-204ENST00000439619 DENND2CQ68D51 928 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 CRTC1Q6UUV9 634 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 PGBD5Q8N414 524 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 SCRN2Q96FV2 425 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 LGMNQ99538 433 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 AMACRQ9UHK6 382 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 ITPR1Q14643 2758 aa18.84■□□□□ 0.61
CCDC78-204ENST00000439619 SSU72P8A0A1W2PR75 194 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 GOLGA6CA6NDK9 693 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 GOLGA6BA6NDN3 693 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 EIF4E1BA6NMX2 242 aaKnown RBP18.83■□□□□ 0.6
CCDC78-204ENST00000439619 TMX2-CTNND1H3BSU7 103 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 MATN3O15232 486 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 DXOO77932 396 aaKnown RBP18.83■□□□□ 0.6
CCDC78-204ENST00000439619 PGLSO95336 258 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 CELA2BP08218 269 aaPredicted RBP18.83■□□□□ 0.6
CCDC78-204ENST00000439619 GOLGA6DP0CG33 693 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 MYCLP1P12525 358 aaPredicted RBP18.83■□□□□ 0.6
CCDC78-204ENST00000439619 IL4RP24394 825 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 MAN1A1P33908 653 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 EPHB1P54762 984 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 GALNT2Q10471 571 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 PEX6Q13608 980 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 DPYSL3Q14195 570 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 TCEA2Q15560 299 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 CNGA3Q16281 694 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 ANKRD20A8PQ5CZ79 823 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 PERM1Q5SV97 790 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 TEX26Q8N6G2 289 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 FAM46DQ8NEK8 389 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 PDXPQ96GD0 296 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 COQ10AQ96MF6 247 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 SEMA3CQ99985 751 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 GOLGA6AQ9NYA3 693 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 DNPEPQ9ULA0 475 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 RAI2Q9Y5P3 530 aa18.83■□□□□ 0.6
CCDC78-204ENST00000439619 GOLGA4Q13439 2230 aaKnown RBP18.82■□□□□ 0.6
CCDC78-204ENST00000439619 TMEM202A6NGA9 273 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 MFSD11O43934 449 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 CD48P09326 243 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 TMEM253P0C7T8 217 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 CCNCP24863 283 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 TRAF2Q12933 501 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms