RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RBM15Q96T37 977 aaKnown RBP eCLIP20.37■□□□□ 0.85
NCKIPSD-206ENST00000439518 LRP4O75096 1905 aa20.37■□□□□ 0.85
NCKIPSD-206ENST00000439518 TMEM202A6NGA9 273 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 DXOO77932 396 aaKnown RBP20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 MPOP05164 745 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 SSR1P43307 286 aaKnown RBP20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 MMP13P45452 471 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 ABCG1P45844 678 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 LSSP48449 732 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 MAXP61244 160 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 TRAF2Q12933 501 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 DPYSL3Q14195 570 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 ASTE1Q2TB18 679 aaPredicted RBP20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 ESRP1Q6NXG1 681 aaKnown RBP20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 PNCKQ6P2M8 343 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 CRTC1Q6UUV9 634 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 PELI3Q8N2H9 469 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 ARL10Q8N8L6 244 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 OR56A4Q8NGH8 313 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 PCDH19Q8TAB3 1148 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 NSMCE1Q8WV22 266 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 OR1E3Q8WZA6 343 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 GRAMD1AQ96CP6 724 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 FGF22Q9HCT0 170 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 UVRAGQ9P2Y5 699 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 DOLKQ9UPQ8 538 aa20.36■□□□□ 0.85
NCKIPSD-206ENST00000439518 CACNB4O00305 520 aaPredicted RBP20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 TNFRSF10CO14798 259 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 PROSCO94903 275 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 HEXIM1O94992 359 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 CPP00450 1065 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 TNFP01375 233 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 TPM3P06753 285 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 VIPR1P32241 457 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 GALNT2Q10471 571 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 ACOX1Q15067 660 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 PAFAH1B3Q15102 231 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 TCEA2Q15560 299 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 CNGA3Q16281 694 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 SLC18A3Q16572 532 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 GKN2Q86XP6 184 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 KYQ8NBH2 561 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 PDCD6IPQ8WUM4 868 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 MCCC1Q96RQ3 725 aaPredicted RBP20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 DNAJC7Q99615 494 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 LGR4Q9BXB1 951 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 PACSIN1Q9BY11 444 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 POLR1BQ9H9Y6 1135 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 CTTNBP2NLQ9P2B4 639 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 GULP1Q9UBP9 304 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 PHTF1Q9UMS5 762 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 GPR34Q9UPC5 381 aa20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 FASNP49327 2511 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-206ENST00000439518 A0A1W2PNU3 283 aaPredicted RBP20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 CASC3O15234 703 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 RRP8O43159 456 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 MFSD11O43934 449 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 TCEA3O75764 348 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 PGLSO95336 258 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 H2AFZP0C0S5 128 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 LHCGRP22888 699 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 KELP23276 732 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 GARSP41250 739 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 TAS2R40P59535 323 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 GABREP78334 506 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 NCBP2-AS2Q69YL0 99 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 SPECC1LQ69YQ0 1117 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 LRRC69Q6ZNQ3 347 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 RBM44Q6ZP01 1051 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 H2AFVQ71UI9 128 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 LSMEM2Q8N112 164 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 OR8K1Q8NGG5 319 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 WDR48Q8TAF3 677 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 CTNNBL1Q8WYA6 563 aaPredicted RBP20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 SCRN2Q96FV2 425 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 HIC2Q96JB3 615 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 CCDC3Q9BQI4 270 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 ZNF670Q9BS34 389 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 WDR26Q9H7D7 661 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 NT5MQ9NPB1 228 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 PPIL1Q9Y3C6 166 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 ENTPD2Q9Y5L3 495 aa20.34■□□□□ 0.85
NCKIPSD-206ENST00000439518 NPIPB15A6NHN6 443 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 NTN3O00634 580 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 PDK2Q15119 407 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 SOWAHCQ53LP3 525 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 ANKRD20A8PQ5CZ79 823 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 ALG1LQ6GMV1 187 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 IGF2-ASQ6U949 168 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 HSD11B1LQ7Z5J1 315 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 KCTD6Q8NC69 237 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 PIH1D2Q8WWB5 315 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 MAML1Q92585 1016 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 FATE1Q969F0 183 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 FAF2Q96CS3 445 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 NUS1Q96E22 293 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 ATXN7L3BQ96GX2 97 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 ZNF578Q96N58 590 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 TSGA13Q96PP4 275 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 ASCL3Q9NQ33 180 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms