RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 IFT43Q96FT9 208 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 PRR11Q96HE9 360 aaPredicted RBP11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 FAR2Q96K12 515 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 CNDP1Q96KN2 507 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 GPR78Q96P69 363 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 EBF4Q9BQW3 602 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 CCDC28BQ9BUN5 200 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 COG4Q9H9E3 785 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 AFF4Q9UHB7 1163 aaKnown RBP11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 VWA7Q9Y334 891 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 LRRC42Q9Y546 428 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 GVINP1Q7Z2Y8 2422 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 KIAA1671Q9BY89 1806 aa11.09□□□□□ -0.63
ERGIC3-207ENST00000438317 MATN2O00339 956 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 DIAPH2O60879 1101 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 CLDN11O75508 207 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 VNN2O95498 520 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 EFEMP2O95967 443 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 HMBSP08397 361 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SERPINF2P08697 491 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 THRAP10827 490 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 TFEBP19484 476 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 NCF2P19878 526 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SAT1P21673 171 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ETFBP38117 255 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SLC1A2P43004 574 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 GRIA4P48058 902 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 NUMBP49757 651 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 TAS2R39P59534 338 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 PRAMEP78395 509 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 MXRA7P84157 204 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 MPP1Q00013 466 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 DSC2Q02487 901 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ACVR1Q04771 509 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 KDSRQ06136 332 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ACAP2Q15057 778 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SIRPB2Q5JXA9 342 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 RTP2Q5QGT7 225 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SEL1L3Q68CR1 1132 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 RSPO2Q6UXX9 243 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 NAPRTQ6XQN6 538 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ACAD11Q709F0 780 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 PIWIL4Q7Z3Z4 852 aaKnown RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SDCCAG8Q86SQ7 713 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SETD3Q86TU7 594 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 RBM23Q86U06 439 aaKnown RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SLC22A9Q8IVM8 553 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 CENPLQ8N0S6 344 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 LGI2Q8N0V4 545 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 AFAP1L2Q8N4X5 818 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 TTC9BQ8N6N2 239 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 RBM15BQ8NDT2 890 aaKnown RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ACVR1CQ8NER5 493 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 BRSK1Q8TDC3 778 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 GIPC2Q8TF65 315 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 KCTD4Q8WVF5 259 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 POF1BQ8WVV4 589 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 STMN2Q93045 179 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 NXNL1Q96CM4 212 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ZNF419Q96HQ0 510 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 OMDQ99983 421 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SEMA3CQ99985 751 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ATXN3LQ9H3M9 355 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 EML4Q9HC35 981 aaKnown RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 NCKIPSDQ9NZQ3 722 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 TRPM5Q9NZQ8 1165 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 UXTQ9UBK9 157 aaPredicted RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SLC2A6Q9UGQ3 507 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 MAFFQ9ULX9 164 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 PLA2G4CQ9UP65 541 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 MRPL42Q9Y6G3 142 aaKnown RBP11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 VPS13AQ96RL7 3174 aa11.08□□□□□ -0.64
ERGIC3-207ENST00000438317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 ILVBLA1L0T0 632 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 CCDC78A2IDD5 438 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 TRPC5OSA6NMA1 111 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 PHGDHO43175 533 aaKnown RBP11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 KDELR3O43731 214 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 DLX3O60479 287 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 PIGNO95427 931 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 NDST3O95803 873 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 S1PR4O95977 384 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 LTA4HP09960 611 aaKnown RBP11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 SBK3P0C264 359 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 GLDCP23378 1020 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 ARRB2P32121 409 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 OR1D2P34982 312 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 CHRNA4P43681 627 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 ABCG1P45844 678 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 COPAP53621 1224 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 NAGLUP54802 743 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 GNA12Q03113 381 aa11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 GALNT1Q10472 559 aaPredicted RBP11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 ZNF177Q13360 481 aaPredicted RBP11.07□□□□□ -0.64
ERGIC3-207ENST00000438317 SMAD1Q15797 465 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms