RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CFAP58Q5T655 872 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 ERAP2Q6P179 960 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 TMCO3Q6UWJ1 677 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 TMPRSS9Q7Z410 1059 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 HSD11B1LQ7Z5J1 315 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 BTN2A2Q8WVV5 523 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 TEKT4Q8WW24 435 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 WDR92Q96MX6 357 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 NUDCD1Q96RS6 583 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 RBM15Q96T37 977 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC4-202ENST00000430200 C1QTNF7Q9BXJ2 289 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SLC13A1Q9BZW2 595 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 XPO4Q9C0E2 1151 aaKnown RBP11.82□□□□□ -0.52
HDAC4-202ENST00000430200 USP29Q9HBJ7 922 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 KLQ9UEF7 1012 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SEPT3Q9UH03 358 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 CAPN11Q9UMQ6 739 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SPENQ96T58 3664 aaKnown RBP11.82□□□□□ -0.52
HDAC4-202ENST00000430200 NTN3O00634 580 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 NOBOXO60393 691 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 DXOO77932 396 aaKnown RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 HEXIM1O94992 359 aaKnown RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 RASGRP1O95267 797 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ANXA6P08133 673 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 CASP14P31944 242 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ETV3P41162 512 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 PEX5P50542 639 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 UBASH3AP57075 661 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 SKOR1P84550 965 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 NSUN2Q08J23 767 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ZNF235Q14590 738 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 GRM3Q14832 879 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ZSCAN23Q3MJ62 389 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ESRP1Q6NXG1 681 aaKnown RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 SDR16C5Q8N3Y7 309 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ATPAF2Q8N5M1 289 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ARL10Q8N8L6 244 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 PDCD6IPQ8WUM4 868 aaKnown RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 SYN2Q92777 582 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 FGF11Q92914 225 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 ZNF599Q96NL3 588 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 FCRL3Q96P31 734 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 MCCC1Q96RQ3 725 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 TMEM168Q9H0V1 697 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 SYNDIG1Q9H7V2 258 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 POLR1BQ9H9Y6 1135 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 MRPL47Q9HD33 250 aaKnown RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 PADI4Q9UM07 663 aa11.81□□□□□ -0.52
HDAC4-202ENST00000430200 PCYT1BQ9Y5K3 369 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-202ENST00000430200 D6RAR5 112 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 TOR1BO14657 336 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 FZD6O60353 706 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 SOCS5O75159 536 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 HGFP14210 728 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 DESP17661 470 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 CTPS1P17812 591 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 VIPR1P32241 457 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 TRIM23P36406 574 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 ARL4AP40617 200 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 MMP13P45452 471 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 LSSP48449 732 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 DUSP3P51452 185 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 CDH6P55285 790 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 DSC2Q02487 901 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 GBE1Q04446 702 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 GALNT2Q10471 571 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 PIGHQ14442 188 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 ACAP1Q15027 740 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 ASTE1Q2TB18 679 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 DENND2CQ68D51 928 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 ALKBH5Q6P6C2 394 aaKnown RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 RBM44Q6ZP01 1051 aaKnown RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 NRROSQ86YC3 692 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 CBARPQ8N350 705 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 TEX26Q8N6G2 289 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 GPR156Q8NFN8 814 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 OR56A4Q8NGH8 313 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 ZNF564Q8TBZ8 553 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 PATE1Q8WXA2 126 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 NUS1Q96E22 293 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 DTD2Q96FN9 168 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 FOXP3Q9BZS1 431 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 BRD8Q9H0E9 1235 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 SUDS3Q9H7L9 328 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-202ENST00000430200 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 NT5MQ9NPB1 228 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 GULP1Q9UBP9 304 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 GPR34Q9UPC5 381 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 DGKBQ9Y6T7 804 aa11.8□□□□□ -0.52
HDAC4-202ENST00000430200 PRSS38A1L453 326 aa11.79□□□□□ -0.52
HDAC4-202ENST00000430200 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
HDAC4-202ENST00000430200 CDRT15L2A8MXV6 281 aa11.79□□□□□ -0.52
HDAC4-202ENST00000430200 B4DGG1 531 aa11.79□□□□□ -0.52
HDAC4-202ENST00000430200 AGRPO00253 132 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms