RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 Q6ZVU0 165 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 KCTD4Q8WVF5 259 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 LRRC19Q9H756 370 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 INTS7Q9NVH2 962 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FZD10Q9ULW2 581 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FSCN2O14926 492 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FAM153BP0C7A2 387 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FAAH2Q6GMR7 532 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ZCCHC8Q6NZY4 707 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ENPP7Q6UWV6 458 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 HHIPL1Q96JK4 782 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 ZMAT2Q96NC0 199 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 TCF7L2Q9NQB0 619 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 NAGLUP54802 743 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 HFE2Q6ZVN8 426 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 C17orf64Q86WR6 236 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 NSL1Q96IY1 281 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 MAGEB18Q96M61 343 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 SLC25A51Q9H1U9 297 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 L2HGDHQ9H9P8 463 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 SCOCQ9UIL1 159 aa17.13■□□□□ 0.33
SMARCA4-203ENST00000429416 CHD4Q14839 1912 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 DNAJC25-GNG10A0A024R161 153 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 EEF1DP29692 281 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 TRPC1P48995 793 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 CYP4F2P78329 520 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 SMG8Q8ND04 991 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 TBATAQ96M53 351 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 FAIM2Q9BWQ8 316 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 COQ4Q9Y3A0 265 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 BTNL10A8MVZ5 291 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 RAB10P61026 200 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 ZNHIT3Q15649 155 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 LDB1Q86U70 411 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 TMEM209Q96SK2 561 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 SH3GL1Q99961 368 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 FLOT2Q14254 428 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 TRPM8Q7Z2W7 1104 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 LCN9Q8WX39 176 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 GFM2Q969S9 779 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 NSUN3Q9H649 340 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 TMBIM4Q9HC24 238 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 KRCC1Q9NPI7 259 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 IL36AQ9UHA7 158 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 SCML2Q9UQR0 700 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 VWA7Q9Y334 891 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 CFHP08603 1231 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 LRRC23Q53EV4 343 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 PAAF1Q9BRP4 392 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 SLC4A5Q9BY07 1137 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 IL1RAPL1Q9NZN1 696 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 NCDNQ9UBB6 729 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 ITPKAP23677 461 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 ACTR1BP42025 376 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 ACTR1AP61163 376 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 RPS7P62081 194 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 HNRNPDQ14103 355 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 ALFQ53S48 1182 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 LMLNQ96KR4 655 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 OSBPL2Q9H1P3 480 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 SCHIP1Q9P0W5 487 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 GTF2A1LQ9UNN4 478 aa17.12■□□□□ 0.33
SMARCA4-203ENST00000429416 SNAP91O60641 907 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 ZNF623O75123 536 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 PIGNO95427 931 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 RB1P06400 928 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 HLA-EP13747 358 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 POU1F1P28069 291 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 CYP4Z1Q86W10 505 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 IQCF5A8MTL0 148 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 S100A3P33764 101 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 ENPEPQ07075 957 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 CDYL2Q8N8U2 506 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 CYGBQ8WWM9 190 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 HAPLN3Q96S86 360 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 ADAMTS5Q9UNA0 930 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 BTAF1O14981 1849 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 ULK1O75385 1050 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 GNPDA1P46926 289 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 TMEM220Q6QAJ8 160 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 SCIMPQ6UWF3 145 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 NOCTQ9UK39 431 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 MYO1CO00159 1063 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 PAGE2Q7Z2X7 111 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 SMOQ99835 787 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 CARS2Q9HA77 564 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 CHRAC1Q9NRG0 131 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 COMMD8Q9NX08 183 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 LIMD1Q9UGP4 676 aa17.11■□□□□ 0.33
SMARCA4-203ENST00000429416 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms