RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 PGAP3Q96FM1 320 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-209ENST00000428450 ZYG11BQ9C0D3 744 aa11.53□□□□□ -0.56
DDX39B-209ENST00000428450 TTYH3Q9C0H2 523 aa11.53□□□□□ -0.56
DDX39B-209ENST00000428450 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
DDX39B-209ENST00000428450 PCDH12Q9NPG4 1184 aa11.53□□□□□ -0.56
DDX39B-209ENST00000428450 CROTQ9UKG9 612 aa11.53□□□□□ -0.56
DDX39B-209ENST00000428450 POLEQ07864 2286 aa11.53□□□□□ -0.56
DDX39B-209ENST00000428450 NAV3Q8IVL0 2385 aa11.53□□□□□ -0.56
DDX39B-209ENST00000428450 MED13LQ71F56 2210 aa11.52□□□□□ -0.56
DDX39B-209ENST00000428450 A0A1B0GVL5 298 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 A8MU76 341 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 MED7O43513 233 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 PFKFB1P16118 471 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 KELP23276 732 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 AK4P27144 223 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 MAN1A1P33908 653 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 GEMIN4P57678 1058 aaKnown RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 GPLD1P80108 840 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 ACBD5Q5T8D3 534 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 PAPD7Q5XG87 772 aaKnown RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 NETO2Q8NC67 525 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 ZNF397Q8NF99 534 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 C5orf34Q96MH7 638 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 GDAP1L1Q96MZ0 367 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 GSDMCQ9BYG8 508 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 UNKQ9C0B0 810 aaKnown RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 CARS2Q9HA77 564 aaKnown RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 PPARGC1AQ9UBK2 798 aaKnown RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-209ENST00000428450 USP25Q9UHP3 1055 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 MOSPD1Q9UJG1 213 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 HPSEQ9Y251 543 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 SLC5A6Q9Y289 635 aa11.52□□□□□ -0.57
DDX39B-209ENST00000428450 TSPAN11A1L157 253 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 CDC14CA4D256 554 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 INSIG1O15503 277 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 HNRNPRO43390 633 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 THAP12O43422 761 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 RECQL5O94762 991 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 CBX6O95503 412 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 RECKO95980 971 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 ERBB2P04626 1255 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 ZNF28P17035 718 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 GM2AP17900 193 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 XPAP23025 273 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 ETFBP38117 255 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 MMP12P39900 470 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 PMS1P54277 932 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 FKBP3Q00688 224 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 SLC6A3Q01959 620 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 RAD51Q06609 339 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 ILF3Q12906 894 aaKnown RBP eCLIP11.51□□□□□ -0.571e-9■■■■□ 21
DDX39B-209ENST00000428450 RAPGEF1Q13905 1077 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 FOXD4L6Q3SYB3 417 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 SNAP47Q5SQN1 464 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 FOXD4L3Q6VB84 417 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 NLRP14Q86W24 1093 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 TP53INP2Q8IXH6 220 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 HCAR2Q8TDS4 363 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 CCDC47Q96A33 483 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 INTS4Q96HW7 963 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 TBCBQ99426 244 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 SLC29A3Q9BZD2 475 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 TRNAU1APQ9NX07 287 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 RRN3Q9NYV6 651 aa11.51□□□□□ -0.57
DDX39B-209ENST00000428450 RCOR3Q9P2K3 495 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
DDX39B-209ENST00000428450 DCHS2Q6V1P9 2916 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 DIDO1Q9BTC0 2240 aaKnown RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 POLR1CO15160 346 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 KATNA1O75449 491 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 CREG1O75629 220 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 TMCC1O94876 653 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 PIGNO95427 931 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 F9P00740 461 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 CEACAM5P06731 702 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 KRT5P13647 590 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 GNA15P30679 374 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 LEPRP48357 1165 aaKnown RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 SULT1E1P49888 294 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 PGDP52209 483 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 DEUP1Q05D60 604 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 BIRC2Q13490 618 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 JMJD6Q6NYC1 403 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 SLC30A9Q6PML9 568 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 WDR74Q6RFH5 385 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 C6orf15Q6UXA7 325 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 ZSWIM9Q86XI8 627 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 ZNF761Q86XN6 746 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-209ENST00000428450 EHBP1Q8NDI1 1231 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 C19orf60Q96EN9 201 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 RNF31Q96EP0 1072 aa11.5□□□□□ -0.57
DDX39B-209ENST00000428450 TWSG1Q9GZX9 223 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms