RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DNMT3LQ9UJW3 386 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF143P52747 638 aaPredicted RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 PERM1Q5SV97 790 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CRTC3Q6UUV7 619 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 FSTL5Q8N475 847 aaPredicted RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SP140LQ9H930 580 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CD163L1Q9NR16 1453 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 FGF19O95750 216 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CDH7Q9ULB5 785 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 MYO3AQ8NEV4 1616 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 PSMD11O00231 422 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 TRMUO75648 421 aaKnown RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 ZNF432O94892 652 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 PEPDP12955 493 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 PNLIPRP1P54315 467 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CCDC107Q8WV48 283 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SEMA4DQ92854 862 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 C11orf24Q96F05 449 aaPredicted RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 OR52E6Q96RD3 313 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 AASSQ9UDR5 926 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 AP4B1Q9Y6B7 739 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 NCANO14594 1321 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 TRAV19A0A0A6YYK7 116 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 NADKO95544 446 aaPredicted RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SERPINA3P01011 423 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SLC5A9Q2M3M2 681 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CNSTQ6PJW8 725 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 LGI2Q8N0V4 545 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CCDC54Q8NEL0 328 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 MBOAT7Q96N66 472 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 DHX33Q9H6R0 707 aaKnown RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 EXO5Q9H790 373 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 RPTORQ8N122 1335 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 ACKR2O00590 384 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 MAP3K6O95382 1288 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CHKAP35790 457 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 ATP5C1P36542 298 aaKnown RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 LARS2Q15031 903 aaKnown RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 XKR6Q5GH73 641 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 CLP1Q92989 425 aaKnown RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SOHLH2Q9NX45 425 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SLC12A4Q9UP95 1085 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 NFASCO94856 1347 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 S100A2P29034 98 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 RBM34P42696 430 aaKnown RBP14.47□□□□□ -0.09
PTPN13-203ENST00000427191 OR4A15Q8NGL6 344 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 SLC5A5Q92911 643 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 OMDQ99983 421 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 MKLN1Q9UL63 735 aa14.47□□□□□ -0.09
PTPN13-203ENST00000427191 PRDX6P30041 224 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 GPR107Q5VW38 600 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 PRR23CQ6ZRP0 262 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 SLITRK4Q8IW52 837 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 MYH8P13535 1937 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 MIPP30301 263 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 PPM1LQ5SGD2 360 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 USP49Q70CQ1 688 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 HPS1Q92902 700 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 GPER1Q99527 375 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 COL6A2P12110 1019 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 CAP2P40123 477 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 PPP3R1P63098 170 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 TFAP2DQ7Z6R9 452 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 CXorf40BQ96DE9 158 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 ACE2Q9BYF1 805 aaPredicted RBP14.46□□□□□ -0.09
PTPN13-203ENST00000427191 OGDHLQ9ULD0 1010 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 RARAP10276 462 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 HTR7P34969 479 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 RASGEF1BQ0VAM2 473 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 TUBA3EQ6PEY2 450 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 BHLHE41Q9C0J9 482 aaPredicted RBP14.46□□□□□ -0.09
PTPN13-203ENST00000427191 LRRC19Q9H756 370 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 MARCH2Q9P0N8 246 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 N6AMT1Q9Y5N5 214 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.09
PTPN13-203ENST00000427191 FADS2P1A8MWK0 482 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 CPTPQ5TA50 214 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 C1orf189Q5VU69 101 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 SUN5Q8TC36 379 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 TAAR1Q96RJ0 339 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 TBC1D24Q9ULP9 559 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 AP5Z1O43299 807 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 FAM153BP0C7A2 387 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 E2F2Q14209 437 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 PTGR2Q8N8N7 351 aaPredicted RBP14.46□□□□□ -0.1
PTPN13-203ENST00000427191 CPB2Q96IY4 423 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 HSFY1Q96LI6 401 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 PHF12Q96QT6 1004 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 ZYG11BQ9C0D3 744 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 LACRTQ9GZZ8 138 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 TKTL2Q9H0I9 626 aa14.46□□□□□ -0.1
PTPN13-203ENST00000427191 FAM124BQ9H5Z6 455 aaPredicted RBP14.46□□□□□ -0.1
PTPN13-203ENST00000427191 AZIN1O14977 448 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 MT-CO1P00395 513 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 ERVK-9P63128 1117 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 INO80EQ8NBZ0 244 aaPredicted RBP14.45□□□□□ -0.1
PTPN13-203ENST00000427191 DNAJC18Q9H819 358 aa14.45□□□□□ -0.1
PTPN13-203ENST00000427191 MAGEE1Q9HCI5 957 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms