RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TRIM10Q9UDY6 481 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 KIAA1257Q9ULG3 409 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 RNF112Q9ULX5 631 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 EFR3BQ9Y2G0 817 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 FAM96BQ9Y3D0 163 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 OR10H1Q9Y4A9 318 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 COL11A1P12107 1806 aaPredicted RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ANAPC1Q9H1A4 1944 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 CCT8L1PA6NM43 557 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 B2RBV5 119 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF185O15231 689 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 OGTO15294 1046 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 AKR1B10O60218 316 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 NDUFS3O75489 264 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 NDUFA10O95299 355 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 NFKB1P19838 968 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 C5AR1P21730 350 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ACAT1P24752 427 aaKnown RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 CPOXP36551 454 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 SYKP43405 635 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ARL4CP56559 192 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 CRYMQ14894 314 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 LRRC14Q15048 493 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 NXPE4Q6UWF7 544 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ENPP6Q6UWR7 440 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 SLC30A10Q6XR72 485 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF793Q6ZN11 406 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 MMAAQ8IVH4 418 aaKnown RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF461Q8TAF7 563 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 NAP1L3Q99457 506 aaPredicted RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 POLDIP3Q9BY77 421 aaKnown RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 POMKQ9H5K3 350 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 MANSC1Q9H8J5 431 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 IMP3Q9NV31 184 aaKnown RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 GTSE1Q9NYZ3 720 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 SEC14L3Q9UDX4 400 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 REXO2Q9Y3B8 237 aaKnown RBP3.57□□□□□ -1.84
TOP2A-201ENST00000423485 WNT6Q9Y6F9 365 aa3.57□□□□□ -1.84
TOP2A-201ENST00000423485 TRBV23OR9-2A0A075B6M9 112 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 C15orf38-AP3S2A0A0A6YYH1 394 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 GFRA2O00451 464 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 LY86O95711 162 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CAPN3P20807 821 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CMPK1P30085 196 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KCNC1P48547 511 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC11A1P49279 550 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 MXI1P50539 228 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 MAP3K7CLP57077 242 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ERVFC1P60507 584 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KCNAB2Q13303 367 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PDE1CQ14123 709 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 DSC3Q14574 896 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CDO1Q16878 200 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SPRED3Q2MJR0 410 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ATP13A5Q4VNC0 1218 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 UBAP2Q5T6F2 1119 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ABHD17CQ6PCB6 329 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RINLQ6ZS11 566 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RRM2BQ7LG56 351 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TICAM1Q8IUC6 712 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.56□□□□□ -1.842e-6■■■■■ 36
TOP2A-201ENST00000423485 CDYL2Q8N8U2 506 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PNPLA1Q8N8W4 532 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ZSCAN4Q8NAM6 433 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CMASQ8NFW8 434 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RAB7BQ96AH8 199 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 THOC1Q96FV9 657 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 GNRHR2Q96P88 292 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 DEFB126Q9BYW3 111 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CEP72Q9P209 647 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ZSWIM5Q9P217 1185 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PTRH2Q9Y3E5 179 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PCDHGC5Q9Y5F6 944 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 PCDHA5Q9Y5H7 936 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SCN8AQ9UQD0 1980 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ANKRD61A6NGH8 418 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 H0Y3Z8 333 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TLR5O60602 858 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 USP1O94782 785 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CSNK1EP49674 416 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 ALDH18A1P54886 795 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TEKQ02763 1124 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TFDP2Q14188 446 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 MLC1Q15049 377 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SKIDA1Q1XH10 827 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CRTC2Q53ET0 693 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 TMEM198Q66K66 360 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CRTC1Q6UUV9 634 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KYAT3Q6YP21 454 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 DPY19L3Q6ZPD9 716 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SNX31Q8N9S9 440 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 CREB3L4Q8TEY5 395 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC5A5Q92911 643 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 IGSF8Q969P0 613 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 LGR4Q9BXB1 951 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 RAB11FIP5Q9BXF6 653 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC39A8Q9C0K1 460 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 SLC25A18Q9H1K4 315 aa3.56□□□□□ -1.84
TOP2A-201ENST00000423485 DDX19AQ9NUU7 478 aaKnown RBP3.56□□□□□ -1.84
TOP2A-201ENST00000423485 KCND2Q9NZV8 630 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms