RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 HSPH1Q92598 858 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 GFM1Q96RP9 751 aaKnown RBP18.55■□□□□ 0.56
SREBF1-206ENST00000423161 ISCUQ9H1K1 167 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 FGF22Q9HCT0 170 aa18.55■□□□□ 0.56
SREBF1-206ENST00000423161 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 TTC24A2A3L6 582 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 CDRT15L2A8MXV6 281 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 D6RAR5 112 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 C1QL1O75973 258 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 TCF4P15884 667 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 GM2AP17900 193 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 AMPD1P23109 780 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 KELP23276 732 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 MLLT3P42568 568 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 CCL7P80098 99 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 TDRD12Q587J7 1177 aaKnown RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 ARHGAP40Q5TG30 622 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 CAVIN1Q6NZI2 390 aaKnown RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 TMCO3Q6UWJ1 677 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 TAF8Q7Z7C8 310 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 B3GNT8Q7Z7M8 397 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 OR6C4Q8NGE1 309 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 LIN37Q96GY3 246 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 WDR26Q9H7D7 661 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 EPB41L5Q9HCM4 733 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 MRPL40Q9NQ50 206 aaKnown RBP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.54■□□□□ 0.56
SREBF1-206ENST00000423161 ETNK2Q9NVF9 386 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 B4GALT6Q9UBX8 382 aa18.54■□□□□ 0.56
SREBF1-206ENST00000423161 ZFC3H1O60293 1989 aaKnown RBP18.53■□□□□ 0.56
SREBF1-206ENST00000423161 SOCS5O75159 536 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 TNFSF15O95150 251 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 SERPINC1P01008 464 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 RPLP0P05388 317 aaKnown RBP18.53■□□□□ 0.56
SREBF1-206ENST00000423161 HOXC4P09017 264 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-206ENST00000423161 TRIM23P36406 574 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 HSPA9P38646 679 aaKnown RBP18.53■□□□□ 0.56
SREBF1-206ENST00000423161 SKOR1P84550 965 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 BOLA3Q53S33 107 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 POLNQ7Z5Q5 900 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 GPR156Q8NFN8 814 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 PDCD6IPQ8WUM4 868 aaKnown RBP18.53■□□□□ 0.56
SREBF1-206ENST00000423161 CCDC97Q96F63 343 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-206ENST00000423161 CSPG4P5Q96PW8 444 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 MOSPD1Q9UJG1 213 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 PCDHGC4Q9Y5F7 938 aa18.53■□□□□ 0.56
SREBF1-206ENST00000423161 HELZ2Q9BYK8 2649 aaKnown RBP18.52■□□□□ 0.56
SREBF1-206ENST00000423161 A0A1W2PQ67 120 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 A0A1W2PQM1 296 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 ERVH48-1M5A8F1 160 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 TNFRSF10CO14798 259 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 HTRA2O43464 458 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-206ENST00000423161 PEX11BO96011 259 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 CPP00450 1065 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 ITGA2BP08514 1039 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 CR2P20023 1033 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 PIGHQ14442 188 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-206ENST00000423161 CNGA3Q16281 694 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 FIGNQ5HY92 759 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 PNCKQ6P2M8 343 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 CLEC14AQ86T13 490 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 PELI3Q8N2H9 469 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 BBS5Q8N3I7 341 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 PGBD5Q8N414 524 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 ATPAF2Q8N5M1 289 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 FAM46DQ8NEK8 389 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 SPOCK2Q92563 424 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 NUS1Q96E22 293 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 COQ10AQ96MF6 247 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 NUDCD1Q96RS6 583 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.52■□□□□ 0.56
SREBF1-206ENST00000423161 LGR4Q9BXB1 951 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 FOXP3Q9BZS1 431 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 STRADBQ9C0K7 418 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 TMEM168Q9H0V1 697 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 LRRN3Q9H3W5 708 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 CYP4F12Q9HCS2 524 aa18.52■□□□□ 0.56
SREBF1-206ENST00000423161 AHCTF1Q8WYP5 2266 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 PRSS38A1L453 326 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 B4DGG1 531 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 PLD2O14939 933 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 MAFKO60675 156 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 RARAP10276 462 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 VIPR1P32241 457 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 INHBCP55103 352 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 RHDQ02161 417 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 VAC14Q08AM6 782 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 NR1I3Q14994 352 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 IQCB1Q15051 598 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 TAF1BQ53T94 588 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-206ENST00000423161 DENND2CQ68D51 928 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 PCSK4Q6UW60 755 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 CCNJLQ8IV13 435 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 TEKT4Q8WW24 435 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 MGME1Q9BQP7 344 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 NOD2Q9HC29 1040 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 PCDH18Q9HCL0 1135 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 COL6A6A6NMZ7 2263 aa18.51■□□□□ 0.55
SREBF1-206ENST00000423161 CFAP46Q8IYW2 2715 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 TMX2-CTNND1H3BSU7 103 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms