RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 RAB41Q5JT25 222 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 ERI1Q8IV48 349 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 FUNDC1Q8IVP5 155 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 RIN3Q8TB24 985 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 IL12RB2Q99665 862 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 TINF2Q9BSI4 451 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 MID1IP1Q9NPA3 183 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 DNAAF2Q9NVR5 837 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 IPO11Q9UI26 975 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 BTBD19C9JJ37 291 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 HHLA1C9JL84 531 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 MT-ND1P03886 318 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 DNAJB1P25685 340 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 GJA5P36382 358 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 CD86P42081 329 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 CDKN2DP55273 166 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 RANBP10Q6VN20 620 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 HDAC10Q969S8 669 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 TSPAN17Q96FV3 270 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 MAML3Q96JK9 1138 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 RANBP9Q96S59 729 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 ABHD16BQ9H3Z7 469 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 CATSPERBQ9H7T0 1116 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 SMOXQ9NWM0 555 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 DUS2Q9NX74 493 aaKnown RBP15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 EBF1Q9UH73 591 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 BTRCQ9Y297 605 aa15.21■□□□□ 0.02
SEMA3B-203ENST00000419007 DHRS12A0PJE2 317 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 PDHXO00330 501 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 NME4O00746 187 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 HNRNPCP07910 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 MYL3P08590 195 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 ADRA1AP35348 466 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 SLC22A9Q8IVM8 553 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 OFCC1Q8IZS5 231 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 CALML6Q8TD86 181 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 TUBGCP3Q96CW5 907 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 KCNA7Q96RP8 456 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 PRKD2Q9BZL6 878 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 THP07101 528 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 IL10P22301 178 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 SERPINH1P50454 418 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 CLCN5P51795 746 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 BEX3Q00994 111 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 C16orf72Q14CZ0 275 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 ACAP2Q15057 778 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 NHSL2Q5HYW2 709 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 PIF1Q9H611 641 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 SLC8A2Q9UPR5 921 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 KCTD3Q9Y597 815 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 RALGAPA2Q2PPJ7 1873 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 OTOFQ9HC10 1997 aa15.2■□□□□ 0.02
SEMA3B-203ENST00000419007 CACNG3O60359 315 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 IMPDH1P20839 514 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 CCR1P32246 355 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PSMD8P48556 350 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 SCNN1GP51170 649 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 ZNF135P52742 658 aaPredicted RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PFKFB4Q16877 469 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 FUT11Q495W5 492 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 FAM45BPQ6NSW5 357 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 TMEM207Q6UWW9 146 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 CYHR1Q6ZMK1 362 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 LARP4Q71RC2 724 aaKnown RBP eCLIP15.19■□□□□ 0.025e-12■■□□□ 12.5
SEMA3B-203ENST00000419007 ERMP1Q7Z2K6 904 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 ZBTB46Q86UZ6 589 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PTGR2Q8N8N7 351 aaPredicted RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 FAM45AQ8TCE6 357 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 ANKRD60Q9BZ19 345 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 RGS18Q9NS28 235 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 MRGBPQ9NV56 204 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 MIOSQ9NXC5 875 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 MARCH4Q9P2E8 410 aaPredicted RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 H0YJX3 145 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 INPP4BO15327 924 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PSMA4P25789 261 aaKnown RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PCSK1P29120 753 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 ALDH3B2P48448 385 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 ARSDP51689 593 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 YBX1P67809 324 aaKnown RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 SH3BP2P78314 561 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 GRB7Q14451 532 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 CAMK1DQ8IU85 385 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 GABPB2Q8TAK5 448 aaPredicted RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 DNAJB14Q8TBM8 379 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 STON2Q8WXE9 905 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 SLC10A4Q96EP9 437 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 SARDHQ9UL12 918 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 CDH9Q9ULB4 789 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 CDC14AQ9UNH5 594 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 TDRKHQ9Y2W6 561 aaKnown RBP15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 TSC2P49815 1807 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 PIP5K1BO14986 540 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 B3GAT3O94766 335 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 CTSHP09668 335 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 LINC00032P0C843 101 aa15.19■□□□□ 0.02
SEMA3B-203ENST00000419007 MTHFD1P11586 935 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms