RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 VAMP7P51809 220 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 EFNA5P52803 228 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 POLR2FP61218 127 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CAPSQ13938 189 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 DAZAP2Q15038 168 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SPA17Q15506 151 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PTPN14Q15678 1187 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SNRNP35Q16560 246 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAPK6Q16659 721 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 EXOC3L4Q17RC7 722 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 DEFB115Q30KQ5 88 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC9C1Q4G0N8 1177 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 AWAT1Q58HT5 328 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SFMBT2Q5VUG0 894 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MFSD14CQ5VZR4 134 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 DENND2CQ68D51 928 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PDXDC1Q6P996 788 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 C17orf99Q6UX52 265 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 GBP6Q6ZN66 633 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC149Q6ZUS6 474 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PTCHD4Q6ZW05 846 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 RRAGAQ7L523 313 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM139Q8IV31 216 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 FMNL3Q8IVF7 1028 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCAR2Q8N163 923 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TXLNBQ8N3L3 684 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 NANOGP1Q8N7R0 232 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 RNF149Q8NC42 400 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM161BQ8NDZ6 487 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRAPPC12Q8WVT3 735 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC35C1Q96A29 364 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 RSPRY1Q96DX4 576 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SAAL1Q96ER3 474 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PPP1R13BQ96KQ4 1090 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF48Q96MX3 618 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 FNBP1Q96RU3 617 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CBWD1Q9BRT8 395 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CRACR2AQ9BSW2 395 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 DESI2Q9BSY9 194 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TCHPQ9BT92 498 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 MSTO1Q9BUK6 570 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 STRA6Q9BX79 667 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 EDEM3Q9BZQ6 932 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 NLRC4Q9NPP4 1024 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 C1orf112Q9NSG2 853 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 SUCLA2Q9P2R7 463 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 AFF4Q9UHB7 1163 aaKnown RBP4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 ITGB1BP2Q9UKP3 347 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 OGDHLQ9ULD0 1010 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 PPP2R2CQ9Y2T4 447 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 DAAM1Q9Y4D1 1078 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 CITO14578 2027 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 DOCK3Q8IZD9 2030 aa4.02□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM43BA6NCK2 446 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 MBD3L4A6NDZ8 208 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 MBD3L3A6NE82 208 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 RRN3P2A6NIE6 340 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF233A6NK53 670 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 USP27XA6NNY8 438 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ANKRD63C9JTQ0 380 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CD3EAPO15446 510 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ASAP2O43150 1006 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 RRP9O43818 475 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 EXTL3O43909 919 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 C22orf31O95567 290 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PIGRP01833 764 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ADRB2P07550 413 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC172P0C7W6 258 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 DLATP10515 647 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ATP5F1P24539 256 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 YY1P25490 414 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 HOXD10P28358 340 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PIK3CAP42336 1068 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PGDP52209 483 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 KRT83P78385 493 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 SP3Q02447 781 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CYP24A1Q07973 514 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 LAMTOR4Q0VGL1 99 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 LMAN2Q12907 356 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 DRP2Q13474 957 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 BIRC3Q13489 604 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRPF4BQ13523 1007 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ARHGEF7Q14155 803 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC29A2Q14542 456 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 MTF1Q14872 753 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ARHGEF6Q15052 776 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIP6Q15654 476 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CNGA2Q16280 664 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCL14Q16627 93 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 KIAA0753Q2KHM9 967 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PLEKHG6Q3KR16 790 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRAMEF19Q5SWL8 479 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM63BQ5T3F8 832 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM65Q6PJ69 517 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 RAD9BQ6WBX8 426 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 TOGARAM2Q6ZUX3 1019 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 VPS36Q86VN1 386 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 KIAA0319LQ8IZA0 1049 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms