RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PCDHA10Q9Y5I2 948 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 GON4LQ3T8J9 2241 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 CENPEQ02224 2701 aa5.64□□□□□ -1.51
ECHDC1-206ENST00000417628 IQANK1A0A1B0GTG1 560 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 A0A1W2PQF6 199 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 MYMKA6NI61 221 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM200CA6NKL6 621 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 GOLGA8KD6RF30 607 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 PTGESO14684 152 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF213O14771 459 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TSPAN1O60635 241 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 USO1O60763 962 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 GFPT2O94808 682 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CYBBP04839 570 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 HNRNPCP07910 306 aaKnown RBP eCLIP5.63□□□□□ -1.513e-6■□□□□ 11
ECHDC1-206ENST00000417628 PORP16435 677 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CD9P21926 228 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 DDX6P26196 483 aaKnown RBP eCLIP5.63□□□□□ -1.512e-7■■■□□ 18.3
ECHDC1-206ENST00000417628 HSPA4P34932 840 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TNFSF9P41273 254 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TNFRSF4P43489 277 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 RECQLP46063 649 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 BRCC3P46736 316 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 IRAK1P51617 712 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF131P52739 623 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ERVFRD-1P60508 538 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CYP4F2P78329 520 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 APBA1Q02410 837 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 KLRB1Q12918 225 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF268Q14587 947 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CASP8Q14790 479 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 SAFBQ15424 915 aaKnown RBP eCLIP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TARBP2Q15633 366 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 UBE2SQ16763 222 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 SMUG1Q53HV7 270 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 GALNT17Q6IS24 598 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 KLC3Q6P597 504 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 PAQR3Q6TCH7 311 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 LAYNQ6UX15 382 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 MFSD6Q6ZSS7 791 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 MILR1Q7Z6M3 343 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 DNAJB7Q7Z6W7 309 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 DAAM2Q86T65 1068 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 EXOC3L1Q86VI1 746 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TRIM48Q8IWZ4 208 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ARL14Q8N4G2 192 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ARL6IP6Q8N6S5 226 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 BCAS4Q8TDM0 211 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 SAP25Q8TEE9 199 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 HTR3CQ8WXA8 447 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ASB15Q8WXK1 588 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 SKA1Q96BD8 255 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 FOXRED1Q96CU9 486 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 VMP1Q96GC9 406 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 PEX11GQ96HA9 241 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CPB2Q96IY4 423 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CLIC6Q96NY7 704 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 NR1H4Q96RI1 486 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 HAPLN3Q96S86 360 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 PNKPQ96T60 521 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CCT7Q99832 543 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 TIPINQ9BVW5 301 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 NAA15Q9BXJ9 866 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 VCXQ9H320 206 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF71Q9NQZ8 489 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CCM2LQ9NUG4 571 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 DDX19AQ9NUU7 478 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 RMND1Q9NWS8 449 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 CFAP45Q9UL16 551 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 PCDHA6Q9UN73 950 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 FADS3Q9Y5Q0 445 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 COMMD3-BMI1R4GMX3 469 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 NEDD4P46934 1319 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 MN1Q10571 1320 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 KNTC1P50748 2209 aa5.63□□□□□ -1.51
ECHDC1-206ENST00000417628 FBN1P35555 2871 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CRYBG3Q68DQ2 2970 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 HEATR9A2RTY3 570 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 PRAMEF25A6NGN4 478 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CCDC69A6NI79 296 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 BTBD18B2RXH4 712 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 E9PMD0 336 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 SYN3O14994 580 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 SKAP2O75563 359 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 ATP6V1G2O95670 118 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 PF4V1P10720 104 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 TRIM27P14373 513 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CALB2P22676 271 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 IL4RP24394 825 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 IGFBP6P24592 240 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC6A4P31645 630 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 THBS2P35442 1172 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 ARL4AP40617 200 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 EIF2DP41214 584 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 ACADSBP45954 432 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 NT5C2P49902 561 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CLCN2P51788 898 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 MTTPP55157 894 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 C21orf59P57076 290 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 KDSRQ06136 332 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms