RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 LIMA1Q9UHB6 759 aaKnown RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 ACSL6Q9UKU0 697 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 GOLGA6CA6NDK9 693 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 GOLGA6BA6NDN3 693 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 TMEM202A6NGA9 273 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 A8MX80 341 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 DFFAO00273 331 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 TNFRSF10CO14798 259 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 NUDT21O43809 227 aaKnown RBP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 PRAMEF11O60813 436 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CCDC172P0C7W6 258 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 GOLGA6DP0CG33 693 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CDK11BP21127 795 aaKnown RBP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CD82P27701 267 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 ALDH4A1P30038 563 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CSNK1DP48730 415 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CSRP3P50461 194 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 ATP1A2P50993 1020 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 JAM2P57087 298 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 ILF3Q12906 894 aaKnown RBP eCLIP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 PEX6Q13608 980 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 SKOR2Q2VWA4 1001 aaPredicted RBP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 ZFAND4Q86XD8 727 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 EXD3Q8N9H8 876 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 TSEN2Q8NCE0 465 aaKnown RBP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 VOPP1Q96AW1 172 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 PCDHB18PQ96TA0 734 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 TMEM168Q9H0V1 697 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 CARS2Q9HA77 564 aaKnown RBP15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 FGF22Q9HCT0 170 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 GOLGA6AQ9NYA3 693 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 AP4E1Q9UPM8 1137 aa15.63■□□□□ 0.09
SBDSP1-201ENST00000415772 ASH1LQ9NR48 2969 aaKnown RBP15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 A0A1W2PQC6 194 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PRSS38A1L453 326 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 BUB1BO60566 1050 aaPredicted RBP15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PPFIA2O75334 1257 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 CPNE6O95741 557 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 FAM87AP0C7U9 286 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PAPOLAP51003 745 aaKnown RBP15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 SCNN1BP51168 640 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 RENBPP51606 427 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PTP4A2Q12974 167 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 NCAPHQ15003 741 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 DENND2CQ68D51 928 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 OGFOD3Q6PK18 319 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 LIPIQ6XZB0 460 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PDCD6IPQ8WUM4 868 aaKnown RBP15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 GSDMCQ9BYG8 508 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PHPT1Q9NRX4 125 aaPredicted RBP15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 GPATCH2LQ9NWQ4 482 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 KCTD5Q9NXV2 234 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 IL17BQ9UHF5 180 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 PCDHGA4Q9Y5G9 962 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 TENM4Q6N022 2769 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 MGAQ8IWI9 3026 aa15.62■□□□□ 0.09
SBDSP1-201ENST00000415772 ATMQ13315 3056 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 LGALS16A8MUM7 142 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 EIF3CLB5ME19 914 aaKnown RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 NOBOXO60393 691 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 RNF8O76064 485 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 PSMA2P25787 234 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 COPB1P53618 953 aaKnown RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 RPL7AP62424 266 aaKnown RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 ZFP36L1Q07352 338 aaKnown RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 SRSF6Q13247 344 aaKnown RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 HLTFQ14527 1009 aaKnown RBP eCLIP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 ZNF235Q14590 738 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 RFTN1Q14699 578 aaPredicted RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 LINC00303Q3SY05 128 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 PPP1R2P3Q6NXS1 205 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 NYAP1Q6ZVC0 841 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 DPPA4Q7L190 304 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 MON1BQ7L1V2 547 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 BBS5Q8N3I7 341 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 ZDHHC1Q8WTX9 485 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 NUS1Q96E22 293 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 EIF3CQ99613 913 aaKnown RBP15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 AGPAT1Q99943 283 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 SLC39A8Q9C0K1 460 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 LRRC19Q9H756 370 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 PDFQ9HBH1 243 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 RDH14Q9HBH5 336 aa15.61■□□□□ 0.09
SBDSP1-201ENST00000415772 A0A1W2PQ67 120 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 STMND1H3BQB6 276 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 HOXC4P09017 264 aaPredicted RBP15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 MYCLP1P12525 358 aaPredicted RBP15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 CCNB1P14635 433 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 ETV5P41161 510 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 ZNF165P49910 485 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 AP1S1P61966 158 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 NFKB2Q00653 900 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 UBXN1Q04323 297 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 ANO6Q4KMQ2 910 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 PPP6R3Q5H9R7 873 aaPredicted RBP15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 PNCKQ6P2M8 343 aa15.6■□□□□ 0.09
SBDSP1-201ENST00000415772 ZSWIM9Q86XI8 627 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms