RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZDHHC13Q8IUH4 622 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 OR4K2Q8NGD2 314 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 ZFP14Q9HCL3 533 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 TK2O00142 265 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 VAV1P15498 845 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 HNRNPH1P31943 449 aaKnown RBP17.31■□□□□ 0.36
PHRF1-202ENST00000413872 HADHBP55084 474 aaKnown RBP17.31■□□□□ 0.36
PHRF1-202ENST00000413872 SMIM11AP58511 58 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 ANXA8L1Q5VT79 327 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 ZNF549Q6P9A3 640 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 CHSY3Q70JA7 882 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 UBE2R2Q712K3 238 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-202ENST00000413872 CDYL2Q8N8U2 506 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 OR52K2Q8NGK3 314 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 NELL1Q92832 810 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 DDX28Q9NUL7 540 aaKnown RBP17.31■□□□□ 0.36
PHRF1-202ENST00000413872 ANAPC2Q9UJX6 822 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 ADAM30Q9UKF2 790 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 FAM237BA0A1B0GVD1 139 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 PER2O15055 1255 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 CDK14O94921 469 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 HGFP14210 728 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 BST1Q10588 318 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 PCSK2P16519 638 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 GBE1Q04446 702 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 OR6K2Q8NGY2 324 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 DTNBP1Q96EV8 351 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 HEPHQ9BQS7 1158 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 MYLK2Q9H1R3 596 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 EPB41L4BQ9H329 900 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 PFKMP08237 780 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CRATP43155 626 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 PCYT1AP49585 367 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 ZNF618Q5T7W0 954 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 GPR180Q86V85 440 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 MCRS1Q96EZ8 462 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 DPEP3Q9H4B8 488 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 FAM83DQ9H4H8 585 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CLIC5Q9NZA1 410 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 FBXW11Q9UKB1 542 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CAB39Q9Y376 341 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 ZFP37Q9Y6Q3 630 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 H3BN98 237 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 MAP2K7O14733 419 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 SHBGP04278 402 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 HOXB6P17509 224 aaKnown RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CCR4P51679 360 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 NPY5RQ15761 445 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 RFWD3Q6PCD5 774 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CRTC3Q6UUV7 619 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 STK32CQ86UX6 486 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 OR6Y1Q8NGX8 325 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 PRCCQ92733 491 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 COL26A1Q96A83 441 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 POLR1DQ9Y2S0 133 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 REXO2Q9Y3B8 237 aaKnown RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 TPRKBQ9Y3C4 175 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 A0A0U1RQF3 1178 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 H3BM21 787 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 FFAR3O14843 346 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 GPR42O15529 346 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 SLC34A1Q06495 639 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CERCAMQ5T4B2 595 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 TAPT1Q6NXT6 567 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 IZUMO2Q6UXV1 221 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 ARL14EPQ8N8R7 260 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 ARMCX1Q9P291 453 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 RNASEH2AO75792 299 aaKnown RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 IDO1P14902 403 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 PSMD8P48556 350 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 DGKGP49619 791 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 RPL38P63173 70 aaKnown RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 KRR1Q13601 381 aaKnown RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 RFTN1Q14699 578 aaPredicted RBP17.3■□□□□ 0.36
PHRF1-202ENST00000413872 CYP4X1Q8N118 509 aa17.3■□□□□ 0.36
PHRF1-202ENST00000413872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.3■□□□□ 0.362e-6■■□□□ 12
PHRF1-202ENST00000413872 ZBTB22O15209 634 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 SERPINI2O75830 405 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 PROCP04070 461 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 ITGA2P17301 1181 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 PPP2R2DQ66LE6 453 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 POMGNT2Q8NAT1 580 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 SUSD3Q96L08 255 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 AIF1LQ9BQI0 150 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TMEM79Q9BSE2 394 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 VPS4AQ9UN37 437 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 INSIG1O15503 277 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 UMPSP11172 480 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TCHHL1Q5QJ38 904 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 APTXQ7Z2E3 356 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 SRFBP1Q8NEF9 429 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 RP9Q8TA86 221 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 GMLQ99445 158 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 GGA2Q9UJY4 613 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 ZNF711Q9Y462 761 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 OR10H1Q9Y4A9 318 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms