RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 SPEM1Q8N4L4 309 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 OR2T3Q8NH03 318 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 TADA1Q96BN2 335 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 ALKBH8Q96BT7 664 aaKnown RBP18.68■□□□□ 0.58
CIRBP-202ENST00000413636 TUBGCP5Q96RT8 1024 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 TBL1YQ9BQ87 522 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 RSPH9Q9H1X1 276 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-202ENST00000413636 EPHX3Q9H6B9 360 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 ATP13A3Q9H7F0 1226 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 KCNK9Q9NPC2 374 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 SARDHQ9UL12 918 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 PPM1HQ9ULR3 514 aa18.68■□□□□ 0.58
CIRBP-202ENST00000413636 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TCRBV21S2A2A0A5A6 115 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TNFRSF10AO00220 468 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PMPCBO75439 489 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 IL1BP01584 269 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 C1QAP02745 245 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PRNPP04156 253 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 UGT2B4P06133 528 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 MAGEA9P43362 315 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 SERPINB9P50453 376 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 CLCN5P51795 746 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TRAF2Q12933 501 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 GRM3Q14832 879 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PCSK7Q16549 785 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 GDPD4Q6W3E5 623 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 ZNF771Q7L3S4 317 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 CACUL1Q86Y37 369 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 CTAGE3PQ8IX95 158 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PIP4K2CQ8TBX8 421 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PBXIP1Q96AQ6 731 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 MKRN2Q9H000 416 aaKnown RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 SLC6A17Q9H1V8 727 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 EPN3Q9H201 632 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TRABDQ9H4I3 376 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 FBRSQ9HAH7 460 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PLAC1Q9HBJ0 212 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 POLMQ9NP87 494 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 SYBUQ9NX95 663 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 BDP1A6H8Y1 2624 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 FAM237BA0A1B0GVD1 139 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TMEM120BA0PK00 339 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PRPF4O43172 522 aaKnown RBP eCLIP18.67■□□□□ 0.584e-9■■□□□ 12.1
CIRBP-202ENST00000413636 RNASEH1O60930 286 aaKnown RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 KRT37O76014 449 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 USP1O94782 785 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 CNTFP26441 200 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 SERPINA4P29622 427 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PSMD8P48556 350 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 DGKEP52429 567 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 SATB1Q01826 763 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 EFTUD2Q15029 972 aaKnown RBP eCLIP18.67■□□□□ 0.589e-15■■■■■ 32.3
CIRBP-202ENST00000413636 POM121L1PQ3SYA9 428 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TTC19Q6DKK2 380 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 KDELC1Q6UW63 502 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 KDELC2Q7Z4H8 507 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PPM1NQ8N819 430 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 TMIEQ8NEW7 156 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 PDCD6IPQ8WUM4 868 aaKnown RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 MTBPQ96DY7 904 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 MRRFQ96E11 262 aaKnown RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 LRIG1Q96JA1 1093 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 IER2Q9BTL4 223 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 COL25A1Q9BXS0 654 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-202ENST00000413636 NKIRAS1Q9NYS0 192 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 RAI2Q9Y5P3 530 aa18.67■□□□□ 0.58
CIRBP-202ENST00000413636 KPNA3O00505 521 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 TRAFD1O14545 582 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 KRT38O76015 456 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 METAP1P53582 386 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 WNT3AP56704 352 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 RPS14P62263 151 aaKnown RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 CRYMQ14894 314 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 SLC14A2Q15849 920 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 ZNF776Q68DI1 518 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 TMEM135Q86UB9 458 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 TMPRSS6Q8IU80 811 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 IPMKQ8NFU5 416 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 MDM1Q8TC05 714 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 PTCD2Q8WV60 388 aaKnown RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 SGSM3Q96HU1 749 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 MRGPRX2Q96LB1 330 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 ZNF641Q96N77 438 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 KLHL32Q96NJ5 620 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 FSD1LQ9BXM9 530 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 TDRD1Q9BXT4 1180 aaKnown RBP18.66■□□□□ 0.58
CIRBP-202ENST00000413636 OSBPL1AQ9BXW6 950 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 SUV39H2Q9H5I1 410 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 CHKBQ9Y259 395 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 RPS6KL1Q9Y6S9 549 aa18.66■□□□□ 0.58
CIRBP-202ENST00000413636 FAM47DPA6NHR8 397 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 C1QTNF3-AMACRE9PGA6 284 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 SOCS5O75159 536 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 USP12O75317 370 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 FAM155BO75949 473 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 SNRPAP09012 282 aaKnown RBP18.65■□□□□ 0.58
CIRBP-202ENST00000413636 GABRG2P18507 467 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 ADRA1AP35348 466 aa18.65■□□□□ 0.58
CIRBP-202ENST00000413636 CST6Q15828 149 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms