RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SLITRK1Q96PX8 696 aa4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 SIGLEC11Q96RL6 698 aa4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 QTRT1Q9BXR0 403 aaKnown RBP4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 RABEP2Q9H5N1 569 aa4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 GPR108Q9NPR9 543 aa4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 DDX4Q9NQI0 724 aaKnown RBP4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 CISD1Q9NZ45 108 aaKnown RBP4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 SEC63Q9UGP8 760 aaKnown RBP4.9□□□□□ -1.63
HMGB3P31-201ENST00000413333 SMIM35A0A1B0GVV1 85 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 LRRC72A6NJI9 287 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 CHL1O00533 1208 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 PPP6CO00743 305 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 ADAM10O14672 748 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 CYP19A1P11511 503 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 GLULP15104 373 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 ANXA7P20073 488 aaKnown RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 HOXA13P31271 388 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 CAPZA2P47755 286 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 TFAP4Q01664 338 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 FAM27E3Q08E93 113 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 ADIPOQQ15848 244 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 C2orf68Q2NKX9 166 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 EPHA10Q5JZY3 1008 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 PMS2CLQ68D20 193 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 ADALQ6DHV7 355 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 FAM47EQ6ZV65 393 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 VSIG1Q86XK7 387 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 RNF168Q8IYW5 571 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 SYT2Q8N9I0 419 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 FAM98AQ8NCA5 519 aaKnown RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 BEST2Q8NFU1 509 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 OR8K5Q8NH50 307 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 SNAPC3Q92966 411 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 IGSF8Q969P0 613 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 TMEM18Q96B42 140 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 RRNAD1Q96FB5 475 aaKnown RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 CCDC34Q96HJ3 373 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 SLC41A2Q96JW4 573 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 HARBI1Q96MB7 349 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 POLDIP3Q9BY77 421 aaKnown RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 RIOX1Q9H6W3 641 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 CYSLTR2Q9NS75 346 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 PADI1Q9ULC6 663 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 PPIEQ9UNP9 301 aaKnown RBP4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 ERVK-11Q9UQG0 969 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 CMAHPQ9Y471 501 aa4.89□□□□□ -1.63
HMGB3P31-201ENST00000413333 TMEM202A6NGA9 273 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 GLOD5A6NK44 160 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 MITFO75030 526 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 HSPA4LO95757 839 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 NUDT3O95989 172 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 AFPP02771 609 aaKnown RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 MYZAPP0CAP1 466 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 MRPS5P82675 430 aaKnown RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 DPTQ07507 201 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 KRT24Q2M2I5 525 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 PCGF3Q3KNV8 242 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 PAPD7Q5XG87 772 aaKnown RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 TMEM198Q66K66 360 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 DENND5BQ6ZUT9 1274 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 ADGRA1Q86SQ6 560 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 AACSQ86V21 672 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 PALB2Q86YC2 1186 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 WDR63Q8IWG1 891 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 MB21D2Q8IYB1 491 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 RBFAQ8N0V3 343 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 TMEM174Q8WUU8 243 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 NSMCE1Q8WV22 266 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 GFM1Q96RP9 751 aaKnown RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 SEPT5Q99719 369 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 FAM110AQ9BQ89 295 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 PCGF1Q9BSM1 259 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 OSGEPL1Q9H4B0 414 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 MSRB1Q9NZV6 116 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 CWC15Q9P013 229 aaKnown RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 MARCH4Q9P2E8 410 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 COG5Q9UP83 839 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 TRPV2Q9Y5S1 764 aa4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 ARHGEF17Q96PE2 2063 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P31-201ENST00000413333 KCNU1A8MYU2 1149 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 VCYO14598 125 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ADAMDEC1O15204 470 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 OGG1O15527 345 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 PAPSS1O43252 624 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 AVILO75366 819 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 BCAR3O75815 825 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 CSPG5O95196 566 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 GGPS1O95749 300 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 LATS1O95835 1130 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ABCB1P08183 1280 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 CHRNB2P17787 502 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 CERS1P27544 350 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 DCTDP32321 178 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 GDF5P43026 501 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 LIG4P49917 911 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 SUOXP51687 545 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ROR1Q01973 937 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 KCNC3Q14003 757 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms