RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 ALG9Q9H6U8 611 aa16.52■□□□□ 0.23
HCG18-233ENST00000412685 EML4Q9HC35 981 aaKnown RBP16.52■□□□□ 0.23
HCG18-233ENST00000412685 SEPT3Q9UH03 358 aa16.52■□□□□ 0.23
HCG18-233ENST00000412685 LRCH1Q9Y2L9 728 aa16.52■□□□□ 0.23
HCG18-233ENST00000412685 H3BNC9 293 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 LIN7AO14910 233 aaPredicted RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 NDST3O95803 873 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 SP100P23497 879 aaPredicted RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 OR1D2P34982 312 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 CDH4P55283 916 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 ZNF549Q6P9A3 640 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 DENND1CQ8IV53 801 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 GPR150Q8NGU9 434 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 SLC26A7Q8TE54 656 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 ZNF184Q99676 751 aaPredicted RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 ZBTB26Q9HCK0 441 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 MTRRQ9UBK8 725 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 COPG1Q9Y678 874 aaKnown RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 ZNF840PA6NDX5 716 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 GNRH1P01148 92 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 SLC4A1P02730 911 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 TUFMP49411 452 aaKnown RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 HERC3Q15034 1050 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 RPS27LQ71UM5 84 aaKnown RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 ISCA2Q86U28 154 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 PDZD8Q8NEN9 1154 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 CEP295NLQ96MC4 621 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 PRICKLE1Q96MT3 831 aaPredicted RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 PSKH2Q96QS6 385 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 UBA2Q9UBT2 640 aaPredicted RBP16.51■□□□□ 0.23
HCG18-233ENST00000412685 FIS1Q9Y3D6 152 aa16.51■□□□□ 0.23
HCG18-233ENST00000412685 COCHO43405 550 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 SKAP2O75563 359 aaPredicted RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 PDHA1P08559 390 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 FDXRP22570 491 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 KCNC1P48547 511 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 SATB1Q01826 763 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 ILF2Q12905 390 aaKnown RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 SEMA3AQ14563 771 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 DEFB115Q30KQ5 88 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 HECTD3Q5T447 861 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 C16orf89Q6UX73 402 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 ADGRG6Q86SQ4 1221 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 CUZD1Q86UP6 607 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 DSELQ8IZU8 1212 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 OR4L1Q8NH43 312 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 CEP70Q8NHQ1 597 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 FAM136AQ96C01 138 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 FAR2Q96K12 515 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 CINPQ9BW66 212 aaPredicted RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 TNFRSF12AQ9NP84 129 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 CATSPERZQ9NTU4 200 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 RIMKLBQ9ULI2 386 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 EIF4E1BA6NMX2 242 aaKnown RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 RGRP47804 291 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 ALDH7A1P49419 539 aaKnown RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 OXCT1P55809 520 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 OVCA2Q8WZ82 227 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 RCN3Q96D15 328 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 SCLYQ96I15 445 aa16.5■□□□□ 0.23
HCG18-233ENST00000412685 CORO1CQ9ULV4 474 aaPredicted RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 PRPF19Q9UMS4 504 aaKnown RBP16.5■□□□□ 0.23
HCG18-233ENST00000412685 CLGNO14967 610 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 CLDN11O75508 207 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 KLKB1P03952 638 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 HOXB8P17481 243 aaPredicted RBP16.49■□□□□ 0.23
HCG18-233ENST00000412685 TIAL1Q01085 375 aaKnown RBP eCLIP16.49■□□□□ 0.23
HCG18-233ENST00000412685 GALNT1Q10472 559 aaPredicted RBP16.49■□□□□ 0.23
HCG18-233ENST00000412685 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 AFAP1L2Q8N4X5 818 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 HIPK4Q8NE63 616 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 PTERQ96BW5 349 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 NSMCE3Q96MG7 304 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 SEZ6LQ9BYH1 1024 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 KDELR3O43731 214 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 OGNP20774 298 aaKnown RBP16.49■□□□□ 0.23
HCG18-233ENST00000412685 IMPDH1P20839 514 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 SCNN1BP51168 640 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 STC1P52823 247 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 DHDDSQ86SQ9 333 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 EXOC2Q96KP1 924 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 GSTO2Q9H4Y5 243 aa16.49■□□□□ 0.23
HCG18-233ENST00000412685 PQBP1O60828 265 aaKnown RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 STC2O76061 302 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 HMGA1P17096 107 aaKnown RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 PMLP29590 882 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 CORO1AP31146 461 aaKnown RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 SGSHP51688 502 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 C1QTNF8P60827 252 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 KLC1Q07866 573 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 SDCCAG8Q86SQ7 713 aaPredicted RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 PELI3Q8N2H9 469 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 PLD4Q96BZ4 506 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 CDKN2AIPNLQ96HQ2 116 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 TRMOQ9BU70 441 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms