RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RBBP8Q99708 897 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 GPR63Q9BZJ6 419 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 SUV39H2Q9H5I1 410 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 CNOT10Q9H9A5 744 aaKnown RBP12.49□□□□□ -0.41
CHMP3-204ENST00000409727 SENP1Q9P0U3 644 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 EPS15L1Q9UBC2 864 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF711Q9Y462 761 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
CHMP3-204ENST00000409727 CCDC162PA2VCL2 907 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 C2CD4DB7Z1M9 353 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 TPP1O14773 563 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 LEFTY1O75610 366 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 KAT7O95251 611 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 LPOP22079 712 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 RPA3P35244 121 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 HNF1BP35680 557 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 GDPD4Q6W3E5 623 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 TAX1BP1Q86VP1 789 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 GDAP1Q8TB36 358 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 STYXQ8WUJ0 223 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 MTBPQ96DY7 904 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 HEPHQ9BQS7 1158 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 FAM167BQ9BTA0 163 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 C12orf65Q9H3J6 166 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 CAB39LQ9H9S4 337 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 PCMTD2Q9NV79 361 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 MARCH4Q9P2E8 410 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 A0A0J9YYE9 177 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 WASH3PC4AMC7 463 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 ARNTLO00327 626 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 RFPL1O75677 317 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 TRBC1P01850 177 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 AHSGP02765 367 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 CTSLP07711 333 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 PRSS56P0CW18 603 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 GABRB3P28472 473 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 SPRP35270 261 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF234Q14588 700 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 EMC10Q5UCC4 262 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 SERPINA13PQ6UXR4 307 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 PHTF2Q8N3S3 785 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 DCLK2Q8N568 766 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 CSGALNACT1Q8TDX6 532 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 CDKN2AIPNLQ96HQ2 116 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 VPS39Q96JC1 886 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 CPEB1Q9BZB8 566 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 INTS9Q9NV88 658 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 FBXO5Q9UKT4 447 aa12.48□□□□□ -0.41
CHMP3-204ENST00000409727 MTO1Q9Y2Z2 717 aaKnown RBP12.48□□□□□ -0.41
CHMP3-204ENST00000409727 NPIPB15A6NHN6 443 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 ANHXE9PGG2 379 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 STX7O15400 261 aaKnown RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 SLC7A4O43246 635 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 HAUS5O94927 633 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 CLDN7O95471 211 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 ALDOAP04075 364 aaKnown RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 CNTFP26441 200 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 GMPRP36959 345 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 PGGT1BP53609 377 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 LIMK2P53671 638 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF789Q5FWF6 425 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 CMC1Q7Z7K0 106 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 TSPAN33Q86UF1 283 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 CNTN4Q8IWV2 1026 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 C2CD4AQ8NCU7 369 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 EID2BQ96D98 161 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF641Q96N77 438 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 MFSD1Q9H3U5 465 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 RABEP2Q9H5N1 569 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 FAM96AQ9H5X1 160 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 UBE2ZQ9H832 354 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-204ENST00000409727 MAGEE1Q9HCI5 957 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 LIMD1Q9UGP4 676 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 FKBPLQ9UIM3 349 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 SLC39A10Q9ULF5 831 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 PKP3Q9Y446 797 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 KIAA1549LQ6ZVL6 1849 aa12.47□□□□□ -0.41
CHMP3-204ENST00000409727 CAPN8A6NHC0 703 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms