RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CEP68Q76N32 757 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 FBXO39Q8N4B4 442 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 POU5F2Q8N7G0 328 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 COG4Q9H9E3 785 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 MID1IP1Q9NPA3 183 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 SPHK2Q9NRA0 654 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 DNMT3BQ9UBC3 853 aaKnown RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 PACSIN3Q9UKS6 424 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 ASF1AQ9Y294 204 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 C2orf71A6NGG8 1288 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 CXorf49A8MYA2 514 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 GOT2P00505 430 aaKnown RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 FGF1P05230 155 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 OR56A5P0C7T3 313 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 RPL10P27635 214 aaKnown RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 AIF1P55008 147 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 Q6ZVL8 140 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 EXOC3L1Q86VI1 746 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 NSMCE4AQ9NXX6 385 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 RCOR3Q9P2K3 495 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 XPR1Q9UBH6 696 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 HEY2Q9UBP5 337 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 CNTN6Q9UQ52 1028 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 ANKRD12Q6UB98 2062 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 GSTA4O15217 222 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 PRAMEF12O95522 483 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 POP4O95707 220 aaKnown RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 C2P06681 752 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 PDHA1P08559 390 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 HADHBP55084 474 aaKnown RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 IL2P60568 153 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 FUT11Q495W5 492 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 ZNF648Q5T619 568 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 PACS1Q6VY07 963 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 MILR1Q7Z6M3 343 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 CYP4X1Q8N118 509 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 TRPC4APQ8TEL6 797 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 OSBPL2Q9H1P3 480 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 RHBGQ9H310 441 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 FAM83DQ9H4H8 585 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 POLR3BQ9NW08 1133 aaPredicted RBP11.43□□□□□ -0.58
SNX13-202ENST00000409604 ZNF510Q9Y2H8 683 aa11.43□□□□□ -0.58
SNX13-202ENST00000409604 GLYATL1P3A0A0U1RQE8 302 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 C5orf60A6NFR6 353 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 NEMP2A6NFY4 417 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 TULP3O75386 442 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 HLA-DPA1P20036 260 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 SLC6A4P31645 630 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 CDK16Q00536 496 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 TCTN1Q2MV58 587 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 PITRM1Q5JRX3 1037 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ZDHHC24Q6UX98 284 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ADGRD2Q7Z7M1 963 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 IGDCC3Q8IVU1 814 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 CFAP206Q8IYR0 622 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 CD101Q93033 1021 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 SIPA1Q96FS4 1042 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ZBTB18Q99592 522 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 GPR21Q99679 349 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 SYTL2Q9HCH5 934 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 SNX15Q9NRS6 342 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 PCDHA11Q9Y5I1 949 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 MEI4A8MW99 385 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 RASGRP1O95267 797 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ITPKAP23677 461 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 MAPKAPK2P49137 400 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 LRRC74AQ0VAA2 488 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 SFSWAPQ12872 951 aaKnown RBP11.42□□□□□ -0.58
SNX13-202ENST00000409604 DHCR24Q15392 516 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 CPSF6Q16630 551 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNX13-202ENST00000409604 FAM26DQ5JW98 314 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 UBAP2Q5T6F2 1119 aaKnown RBP11.42□□□□□ -0.58
SNX13-202ENST00000409604 SLC8B1Q6J4K2 584 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 HID1Q8IV36 788 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 MOCOSQ96EN8 888 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 LINGO1Q96FE5 620 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 OXNAD1Q96HP4 312 aaPredicted RBP11.42□□□□□ -0.58
SNX13-202ENST00000409604 ILKAPQ9H0C8 392 aaPredicted RBP11.42□□□□□ -0.58
SNX13-202ENST00000409604 DPEP2Q9H4A9 486 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 FBXL12Q9NXK8 326 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 NCKIPSDQ9NZQ3 722 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 SLC24A2Q9UI40 661 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ZNF831Q5JPB2 1677 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 GPR179Q6PRD1 2367 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 CCDC162PA2VCL2 907 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 EIF3HO15372 352 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNX13-202ENST00000409604 GPR39O43194 453 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 PRSS56P0CW18 603 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 HOXB2P14652 356 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ALDH9A1P49189 494 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 NDST2P52849 883 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 FAM189BP81408 668 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 UGT3A1Q6NUS8 523 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 ARHGAP24Q8N264 748 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 PTGR2Q8N8N7 351 aaPredicted RBP11.42□□□□□ -0.58
SNX13-202ENST00000409604 SMARCD2Q92925 531 aa11.42□□□□□ -0.58
SNX13-202ENST00000409604 GFM2Q969S9 779 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms