RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SNX30Q5VWJ9 437 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 SCD5Q86SK9 330 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 KCNMB4Q86W47 210 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 DDX51Q8N8A6 666 aaKnown RBP eCLIP13□□□□□ -0.33
SMARCB1-203ENST00000407082 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 CALML6Q8TD86 181 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 SMARCD2Q92925 531 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 PTPRN2Q92932 1015 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 ZSWIM3Q96MP5 696 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 ASB16Q96NS5 453 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 CDK5RAP1Q96SZ6 601 aaKnown RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 TBL1YQ9BQ87 522 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 KIFC1Q9BW19 673 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC46A2Q9BY10 475 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 SIK2Q9H0K1 926 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 TASP1Q9H6P5 420 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 TMPRSS4Q9NRS4 437 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 C20orf96Q9NUD7 363 aaPredicted RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 C2orf42Q9NWW7 574 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 PPARGC1AQ9UBK2 798 aaKnown RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 IPO11Q9UI26 975 aaKnown RBP13□□□□□ -0.33
SMARCB1-203ENST00000407082 TLK1Q9UKI8 766 aa13□□□□□ -0.33
SMARCB1-203ENST00000407082 IGF2RP11717 2491 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 C2orf78A6NCI8 922 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 DFFAO00273 331 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 GYG2O15488 501 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 UGT1A9O60656 530 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 PAGE1O75459 146 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.339e-7■■■■■ 33.4
SMARCB1-203ENST00000407082 MAGEA12P43365 314 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC1A6P48664 564 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 RENBPP51606 427 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 MLLT6P55198 1093 aaPredicted RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 PDE1CQ14123 709 aaPredicted RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 HECTD3Q5T447 861 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 MANEALQ5VSG8 457 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 KIRREL3Q8IZU9 778 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 ARL14EPQ8N8R7 260 aaPredicted RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 RTL3Q8N8U3 475 aaKnown RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 ZSCAN18Q8TBC5 510 aaPredicted RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 PIWIL2Q8TC59 973 aaKnown RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 MCUR1Q96AQ8 359 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 FCRL2Q96LA5 508 aaPredicted RBP12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 RILPQ96NA2 401 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 CYP2S1Q96SQ9 504 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 CCSER2Q9H7U1 834 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 UGT1A7Q9HAW7 530 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 UGT1A10Q9HAW8 530 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 UGT1A8Q9HAW9 530 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 KCNK13Q9HB14 408 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 NMUR1Q9HB89 426 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 OSER1Q9NX31 292 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 CLIC5Q9NZA1 410 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 ZMYM5Q9UJ78 669 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 SHROOM3Q8TF72 1996 aa12.99□□□□□ -0.33
SMARCB1-203ENST00000407082 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TRAV19A0A0A6YYK7 116 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 HMX2A2RU54 273 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 SOBPA7XYQ1 873 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 FCHO1O14526 889 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 GIPC1O14908 333 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 HGSO14964 777 aaPredicted RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 ATP9BO43861 1147 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TLR5O60602 858 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 RPP40O75818 363 aaKnown RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 PROCP04070 461 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 ALDOAP04075 364 aaKnown RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 SERPINA6P08185 405 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 ERVK-10P10266 1014 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 RALBP11234 206 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 CPA3P15088 417 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 RHOQP17081 205 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 HDCP19113 662 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 SERPINB3P29508 390 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 AVPR1AP37288 418 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TUBP50607 506 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TBX4P57082 545 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 CRADDP78560 199 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 THOC5Q13769 683 aaKnown RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 DNAL1Q4LDG9 190 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 PKN3Q6P5Z2 889 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 KBTBD6Q86V97 674 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 WDR5BQ86VZ2 330 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TMPRSS6Q8IU80 811 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 ARID3BQ8IVW6 561 aaPredicted RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 LMNTD2Q8IXW0 634 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 CMTM8Q8IZV2 173 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 KIF2BQ8N4N8 673 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 NPWQ8N729 165 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC7A6OSQ96CW6 309 aaPredicted RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 SLC22A12Q96S37 553 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 FAM167BQ9BTA0 163 aa12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 MLPHQ9BV36 600 aaPredicted RBP12.98□□□□□ -0.33
SMARCB1-203ENST00000407082 TBC1D10AQ9BXI6 508 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms