RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 VCYO14598 125 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 TCERG1O14776 1098 aaKnown RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 KIF1CO43896 1103 aaKnown RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZNF500O60304 480 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC25A12O75746 678 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 TPPPO94811 219 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 KCNK5O95279 499 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ADRB2P07550 413 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 MMP2P08253 660 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 MMP3P08254 477 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 SELLP14151 372 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZNF182P17025 639 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 CDH2P19022 906 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 TNFRSF1BP20333 461 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ABCG1P45844 678 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 CAMPP49913 170 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 PRAMEP78395 509 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 PPATQ06203 517 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 IKQ13123 557 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 GPR18Q14330 331 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 PTGR1Q14914 329 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ETFDHQ16134 617 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 BMP2KLQ5H9B9 411 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 Q6ZSV7 163 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 Q6ZTK2 550 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 AACSQ86V21 672 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 RPAP2Q8IXW5 612 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 TEX11Q8IYF3 940 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 CCDC105Q8IYK2 499 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 GABPB2Q8TAK5 448 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 NEK9Q8TD19 979 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC35F5Q8WV83 523 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 IGSF8Q969P0 613 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC25A28Q96A46 364 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 COQ8BQ96D53 544 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 SAT2Q96F10 170 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZFYVE19Q96K21 471 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 GFM1Q96RP9 751 aaKnown RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ABHD1Q96SE0 405 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM47Q9BQJ4 181 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ISCUQ9H1K1 167 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 CLK4Q9HAZ1 481 aaKnown RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZBTB40Q9NUA8 1239 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 NKIRAS2Q9NYR9 191 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 SUCLA2Q9P2R7 463 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 C11orf21Q9P2W6 132 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 MTMR6Q9Y217 621 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 INSL5Q9Y5Q6 135 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 UTYO14607 1347 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 WDR91A4D1P6 747 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM202A6NGA9 273 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TIMM23O14925 209 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 ADAM20O43506 726 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZC3H11AO75152 810 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 NDUFS3O75489 264 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 FTCDO95954 541 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 IFNA2P01563 188 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 FGF2P09038 288 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MYZAPP0CAP1 466 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MMP13P45452 471 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC15A1P46059 708 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MRPL12P52815 198 aaKnown RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MFAP4P55083 255 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 NANOS3P60323 173 aaKnown RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 EPS8Q12929 822 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 HNF4GQ14541 408 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TRIP6Q15654 476 aaKnown RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 EZH2Q15910 746 aaKnown RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 Q5PR19 223 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 DCAF12L2Q5VW00 463 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 SARM1Q6SZW1 724 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 PARM1Q6UWI2 310 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 B3GNT6Q6ZMB0 384 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 KRBA2Q6ZNG9 492 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 CFAP77Q6ZQR2 320 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 SEPT14Q6ZU15 432 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MTSS1LQ765P7 747 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZNF367Q7RTV3 350 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 PALB2Q86YC2 1186 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 DNAJC10Q8IXB1 793 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TEX45Q8NA69 505 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 POC5Q8NA72 575 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 C1orf131Q8NDD1 294 aaKnown RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 BEST2Q8NFU1 509 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 C16orf52Q8NHV5 167 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 JAKMIP2Q96AA8 810 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC41A2Q96JW4 573 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TRMOQ9BU70 441 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 FOXP1Q9H334 677 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 NDST4Q9H3R1 872 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 ESRP2Q9H6T0 727 aaKnown RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 DECR2Q9NUI1 292 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM51Q9NW97 253 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 PAG1Q9NWQ8 432 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 TUBA8Q9NY65 449 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 OGFRQ9NZT2 677 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC9A2Q9UBY0 812 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 NFE2L3Q9Y4A8 694 aa3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MAGED1Q9Y5V3 778 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P17-201ENST00000403495 MAU2Q9Y6X3 613 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms