RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ECEL1O95672 775 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KRT7P08729 469 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 THRAP10827 490 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 F8A1P23610 371 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 AK4P27144 223 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ALDH4A1P30038 563 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 KRT9P35527 623 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ATP1A2P50993 1020 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CDC20Q12834 499 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 DEFB109BQ30KR1 87 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ANKS6Q68DC2 871 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PHLDB2Q86SQ0 1253 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CAMK1DQ8IU85 385 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 FAM71AQ8IYT1 594 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 JOSD2Q8TAC2 188 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GPBAR1Q8TDU6 330 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RNF31Q96EP0 1072 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SUV39H2Q9H5I1 410 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 DNAJC12Q9UKB3 198 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TP53TG5Q9Y2B4 290 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PLEKHM1Q9Y4G2 1056 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 MRPS18BQ9Y676 258 aaKnown RBP11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
SPTLC1P3-201ENST00000403408 IGHV1OR21-1A0A087WYE8 117 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PRR19A6NJB7 356 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ZNF891A8MT65 544 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 BIN1O00499 593 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 IGSF6O95976 241 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 FURINP09958 794 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RHOAP61586 193 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PTK2Q05397 1052 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ELP6Q0PNE2 266 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 STIM1Q13586 685 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ACBD5Q5T8D3 534 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TMEM164Q5U3C3 297 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 LIPIQ6XZB0 460 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 NAGSQ8N159 534 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ZDHHC1Q8WTX9 485 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RTP4Q96DX8 246 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CTRCQ99895 268 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 DDA1Q9BW61 102 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SUDS3Q9H7L9 328 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 LRRC4CQ9HCJ2 640 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 APMAPQ9HDC9 416 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SLC39A1Q9NY26 324 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TAAR2Q9P1P5 351 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ATP8A1Q9Y2Q0 1164 aa11.93□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ADGRG4Q8IZF6 3080 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PRSS38A1L453 326 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 EFCAB7A8K855 629 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TNFRSF10CO14798 259 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GNA14O95837 355 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PDGFAP04085 211 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CEACAM5P06731 702 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PLEKP08567 350 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HOXC4P09017 264 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CCNB1P14635 433 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ETFBP38117 255 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 HDAC4P56524 1084 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GEMIN4P57678 1058 aaKnown RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SQSTM1Q13501 440 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CDO1Q16878 200 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 LACTB2Q53H82 288 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 INO80DQ53TQ3 878 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 NOP9Q86U38 636 aaKnown RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ZNF761Q86XN6 746 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 OR4D9Q8NGE8 314 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RXFP2Q8WXD0 754 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CPA5Q8WXQ8 436 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TBC1D31Q96DN5 1066 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CATSPER2Q96P56 530 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CSMD2Q7Z408 3487 aa11.92□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RHPN2P1A8MT19 583 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 A8MX80 341 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 B4E171 279 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RASA4BC9J798 803 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 J3KR12 359 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 RASA4O43374 803 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SEMA7AO75326 666 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 EML2O95834 649 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CYP11B1P15538 503 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GNLYP22749 145 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 TSPAN7P41732 249 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 POLD2P49005 469 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 SUOXP51687 545 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 NOMO3P69849 1222 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PAK1Q13153 545 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 PTPRRQ15256 657 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 CAPRIN2Q6IMN6 1127 aaKnown RBP11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 GBP6Q6ZN66 633 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 AGBL5Q8NDL9 886 aa11.91□□□□□ -0.5
SPTLC1P3-201ENST00000403408 ATL2Q8NHH9 583 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms