RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
PTPN6-202ENST00000399448 RNF186Q9NXI6 227 aa13.73□□□□□ -0.21
PTPN6-202ENST00000399448 ASB3Q9Y575 518 aa13.73□□□□□ -0.21
PTPN6-202ENST00000399448 CCDC162PA2VCL2 907 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 MOXD2PA6NHM9 499 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 MUSKO15146 869 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 UBDO15205 165 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 SMIM24O75264 130 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 GPC4O75487 556 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 BCAS2O75934 225 aaPredicted RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 VCLP18206 1134 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ALDH1A3P47895 512 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 KCNC1P48547 511 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 AQP4P55087 323 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 C1QTNF8P60827 252 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 NFKB2Q00653 900 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 MS4A2Q01362 244 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 CAP1Q01518 475 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 MED21Q13503 144 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 C5orf22Q49AR2 442 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ZNF678Q5SXM1 525 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ZNF549Q6P9A3 640 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 RNF19BQ6ZMZ0 732 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 DLG3Q92796 817 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 USP13Q92995 863 aaPredicted RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 DNAJC1Q96KC8 554 aaKnown RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 BTBD9Q96Q07 612 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 YIPF3Q9GZM5 350 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 CRISPLD1Q9H336 500 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 POPDC3Q9HBV1 291 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 TRPC7Q9HCX4 862 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 MRPL40Q9NQ50 206 aaKnown RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 F5H5T6 163 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 PSMD12O00232 456 aaPredicted RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 TLR5O60602 858 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 GJB3O75712 270 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 SUPT7LO94864 414 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 VNN2O95498 520 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 SLC4A1P02730 911 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 SERPINF2P08697 491 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 CD1DP15813 335 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 SUOXP51687 545 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 UNC50Q53HI1 259 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ALG1LQ6GMV1 187 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 GK5Q6ZS86 529 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 RPS27LQ71UM5 84 aaKnown RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 PIM3Q86V86 326 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 LGI2Q8N0V4 545 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 BBS5Q8N3I7 341 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 ICA1LQ8NDH6 482 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 TMA16Q96EY4 203 aaKnown RBP13.72□□□□□ -0.21
PTPN6-202ENST00000399448 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 CCSER2Q9H7U1 834 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
PTPN6-202ENST00000399448 VWA8A3KMH1 1905 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 STX16-NPEPL1H3BU86 382 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 H7C4K7 107 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 TRIM38O00635 465 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 UBFD1O14562 309 aaKnown RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 ENPP3O14638 875 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 TBC1D4O60343 1298 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 RNASEH1O60930 286 aaKnown RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 TRPA1O75762 1119 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 NDST3O95803 873 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 ZCCHC18P0CG32 403 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 OGNP20774 298 aaKnown RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 PSMD8P48556 350 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 PSME3P61289 254 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 HERVK_113P63132 956 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 DUSP4Q13115 394 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 FASTKQ14296 549 aaKnown RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 GALNT3Q14435 633 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 PTPRCAPQ14761 206 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 GRAMD1BQ3KR37 738 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 RSPO2Q6UXX9 243 aaPredicted RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 OR4L1Q8NH43 312 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 C2orf15Q8WU43 125 aaKnown RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 PTERQ96BW5 349 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 LRGUKQ96M69 825 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 ASB2Q96Q27 587 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 TUBGCP5Q96RT8 1024 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
PTPN6-202ENST00000399448 ERVK-6Q9BXR3 956 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 MAGEH1Q9H213 219 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 MARCH5Q9NX47 278 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 DTNAQ9Y4J8 743 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 CASP8AP2Q9UKL3 1982 aa13.71□□□□□ -0.21
PTPN6-202ENST00000399448 THSD7BQ9C0I4 1608 aa13.71□□□□□ -0.22
PTPN6-202ENST00000399448 ACOT8O14734 319 aa13.71□□□□□ -0.22
PTPN6-202ENST00000399448 PIM1P11309 404 aaPredicted RBP13.71□□□□□ -0.22
PTPN6-202ENST00000399448 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.22
PTPN6-202ENST00000399448 KCNQ1P51787 676 aa13.71□□□□□ -0.22
PTPN6-202ENST00000399448 MRPS22P82650 360 aaKnown RBP13.71□□□□□ -0.22
PTPN6-202ENST00000399448 TIAL1Q01085 375 aaKnown RBP eCLIP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms