RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 OR6B1O95007 311 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 EPN2O95208 641 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CYP2B6P20813 491 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CNTN1Q12860 1018 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 MERTKQ12866 999 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 DGKZQ13574 1117 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 UBAP2Q5T6F2 1119 aaKnown RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 INTS11Q5TA45 600 aaKnown RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 TYW3Q6IPR3 259 aaKnown RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 TXNDC11Q6PKC3 985 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 SPATA19Q7Z5L4 167 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CYP4Z1Q86W10 505 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 IGDCC3Q8IVU1 814 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 PARP8Q8N3A8 854 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CCDC185Q8N715 623 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 FAM124BQ9H5Z6 455 aaPredicted RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 ZFP14Q9HCL3 533 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 UBAP1Q9NZ09 502 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CRNNQ9UBG3 495 aaPredicted RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 RGPD1P0DJD0 1748 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CLDN5O00501 218 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 DHX15O43143 795 aaKnown RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 ARIH2O95376 493 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 T-ENOLP0DO92 83 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 TAS2R39P59534 338 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 RPL38P63173 70 aaKnown RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 DPYSL2Q16555 572 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 HECTD2Q5U5R9 776 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 ADCK2Q7Z695 626 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 SEMA3CQ99985 751 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 FAM126AQ9BYI3 521 aaPredicted RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 ATP13A1Q9HD20 1204 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 MOSPD1Q9UJG1 213 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 U3KQV3 271 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 SLIT2O94813 1529 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 E7ESA3 106 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 STX16-NPEPL1H3BU86 382 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 PDE9AO76083 593 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 ASPAP45381 313 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 KPNA1P52294 538 aaPredicted RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 CDH15P55291 814 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 MAXP61244 160 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 PITRM1Q5JRX3 1037 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 MBLAC2Q68D91 279 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 TIFABQ6ZNK6 161 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 OTOP3Q7RTS5 596 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 ZDHHC14Q8IZN3 488 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 TWIST2Q8WVJ9 160 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 CANT1Q8WVQ1 401 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 SELENOMQ8WWX9 145 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 HSPBAP1Q96EW2 488 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 PARK7Q99497 189 aaKnown RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 COLEC11Q9BWP8 271 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 ADGRE2Q9UHX3 823 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 VPS28Q9UK41 221 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 MAFBQ9Y5Q3 323 aaPredicted RBP11.08□□□□□ -0.64
HPS4-202ENST00000398145 LRRC37A3O60309 1634 aa11.08□□□□□ -0.64
HPS4-202ENST00000398145 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 GPR25O00155 361 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 HOXB6P17509 224 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 NR4A1P22736 598 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 MTHFRP42898 656 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 HSDL1Q3SXM5 330 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 PAOXQ6QHF9 649 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CASP12Q6UXS9 341 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 AQP12AQ8IXF9 295 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CENPIQ92674 756 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 NODALQ96S42 347 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 RNF181Q9P0P0 153 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 RAPGEFL1Q9UHV5 662 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 SAMHD1Q9Y3Z3 626 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 SNX8Q9Y5X2 465 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 FAM25AB3EWG3 89 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 FAM25CB3EWG5 89 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 FAM25GB3EWG6 89 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 C9JVG2 144 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 RFPL1O75677 317 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 NMBRP28336 390 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CDK9P50750 372 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 RHDQ02161 417 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 LSAMPQ13449 338 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 PDCD4Q53EL6 469 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 SLC9A4Q6AI14 798 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 DENND5AQ6IQ26 1287 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 SLC39A4Q6P5W5 647 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 C11orf74Q86VG3 221 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 TTC30BQ8N4P2 665 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 HTRA1Q92743 480 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 GAD1Q99259 594 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 UXTQ9UBK9 157 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 ADAM30Q9UKF2 790 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 MYH7P12883 1935 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms