RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SLC13A5Q86YT5 568 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 REXO1L1PQ8IX06 675 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 OXR1Q8N573 874 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 ELF4Q99607 663 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 MLPHQ9BV36 600 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 DNPEPQ9ULA0 475 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 FNDC3AQ9Y2H6 1198 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 PPIL1Q9Y3C6 166 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 A0A0J9YYE9 177 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 TCRBV7S2A1N4TA0A589 114 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 NPIPB15A6NHN6 443 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 F5H423 210 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 KIF5CO60282 957 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 RECQL5O94762 991 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 HEXIM1O94992 359 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 MT-CYBP00156 380 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 TRBC1P01850 177 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 CCT8P50990 548 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 THOP1P52888 689 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 CDK18Q07002 472 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 ZNF569Q5MCW4 686 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 SPATS2Q86XZ4 545 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 ERVMER34-1Q9H9K5 563 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 MBNL1Q9NR56 388 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 FAM153AQ9UHL3 310 aa25.43■■□□□ 1.66
TSPAN4-207ENST00000397411 PRLP01236 227 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 PCCBP05166 539 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 ZNF883P0CG24 379 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 CD68P34810 354 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 IL9RQ01113 521 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 KLF1Q13351 362 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 GALNT3Q14435 633 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 PRPSAP1Q14558 356 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 PTPRRQ15256 657 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 IRF4Q15306 451 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 SLC14A2Q15849 920 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 CNGA3Q16281 694 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 WSCD2Q2TBF2 565 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 TP53I13Q8NBR0 393 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 SETD7Q8WTS6 366 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 FCRL5Q96RD9 977 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 MCCC1Q96RQ3 725 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 TLR10Q9BXR5 811 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 SLC32A1Q9H598 525 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 KCTD5Q9NXV2 234 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 R3HDM2Q9Y2K5 976 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 JRKLQ9Y4A0 524 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 ASCC3Q8N3C0 2202 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 CEP250Q9BV73 2442 aa25.42■■□□□ 1.66
TSPAN4-207ENST00000397411 ANKRD66B4E2M5 251 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 CEP104O60308 925 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 IGFALSP35858 605 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 PDE1CQ14123 709 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 PTK2BQ14289 1009 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 QPCTQ16769 361 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 ANKRD20A2Q5SQ80 823 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 ANKRD20A1Q5TYW2 823 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 ANKRD20A3Q5VUR7 823 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 CRTC1Q6UUV9 634 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 TSPAN33Q86UF1 283 aa25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 FRMD8P1Q9BZ68 369 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-207ENST00000397411 A0A1B0GTQ1 180 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 CAPN8A6NHC0 703 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 PSMD11O00231 422 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 TOR1BO14657 336 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 ENC1O14682 589 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 YKT6O15498 198 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 YPEL5P62699 121 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 INPP5AQ14642 412 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 AGERQ15109 404 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 LRRC66Q68CR7 880 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 DGLUCYQ7Z3D6 616 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 CCHCR1Q8TD31 782 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 MAIP1Q8WWC4 291 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 NUS1Q96E22 293 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 SMIM14Q96QK8 99 aa25.4■■□□□ 1.66
TSPAN4-207ENST00000397411 GOLGA6CA6NDK9 693 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 GOLGA6BA6NDN3 693 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 ANXA9O76027 345 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 NDST3O95803 873 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 ITGAVP06756 1048 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 GOLGA6DP0CG33 693 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 CD59P13987 128 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 ZNF30P17039 623 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 LHCGRP22888 699 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 CXCR5P32302 372 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 GEMP55040 296 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 WNT3AP56704 352 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 PFN3P60673 137 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 HSD11B1LQ7Z5J1 315 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 FAM71DQ8N9W8 422 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 CCDC110Q8TBZ0 833 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 COQ10AQ96MF6 247 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 USP29Q9HBJ7 922 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 DNAJC28Q9NX36 388 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 GOLGA6AQ9NYA3 693 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 PCDHGB2Q9Y5G2 931 aa25.39■■□□□ 1.66
TSPAN4-207ENST00000397411 TDRD6O60522 2096 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-207ENST00000397411 A0A0U1RQS6 177 aa25.38■■□□□ 1.65
TSPAN4-207ENST00000397411 C1orf232A0A0U1RR37 186 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms