RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ARHGEF7Q14155 803 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 TFDP2Q14188 446 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 INPP5AQ14642 412 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 FAXCQ5TGI0 409 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 SLC9A4Q6AI14 798 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 ESRP1Q6NXG1 681 aaKnown RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 ZSWIM9Q86XI8 627 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 CCDC13Q8IYE1 715 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PHACTR4Q8IZ21 702 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PGBD5Q8N414 524 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PQLC3Q8N755 202 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 CCNYQ8ND76 341 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 MCCC1Q96RQ3 725 aaPredicted RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 SEMA3CQ99985 751 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 APOOQ9BUR5 198 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 MBNL1Q9NR56 388 aaKnown RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 RBM22Q9NW64 420 aaKnown RBP eCLIP13.99□□□□□ -0.177e-11■■■■■ 30.5
SEC13-204ENST00000397099 DTLQ9NZJ0 730 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 DKK4Q9UBT3 224 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PCDHGC4Q9Y5F7 938 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PLXNB3Q9ULL4 1909 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 K7ESM1 405 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 TRIM38O00635 465 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 TNFRSF10CO14798 259 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 HEXIM1O94992 359 aaKnown RBP13.98□□□□□ -0.17
SEC13-204ENST00000397099 KRT1P04264 644 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 JUPP14923 745 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 TSHRP16473 764 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 ITIH2P19823 946 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 FECHP22830 423 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 TEAD1P28347 426 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 TRIM23P36406 574 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 HK3P52790 923 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 MAXP61244 160 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 GBE1Q04446 702 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 RALGDSQ12967 914 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 EIF2B5Q13144 721 aaKnown RBP13.98□□□□□ -0.17
SEC13-204ENST00000397099 PEX6Q13608 980 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 ACOX1Q15067 660 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 C11orf63Q6NUN7 778 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 NLRP8Q86W28 1048 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 WDR48Q8TAF3 677 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 WDR92Q96MX6 357 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 UCKL1Q9NWZ5 548 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 B4GALT6Q9UBX8 382 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 LHX6Q9UPM6 363 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 RAI2Q9Y5P3 530 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 DGKBQ9Y6T7 804 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 CHD6Q8TD26 2715 aa13.98□□□□□ -0.17
SEC13-204ENST00000397099 TRABD2BA6NFA1 517 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 C3orf70A6NLC5 250 aaPredicted RBP13.97□□□□□ -0.17
SEC13-204ENST00000397099 FFAR2O15552 330 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 MTSS1O43312 755 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 FZD6O60353 706 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 TNFP01375 233 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 CAPNS1P04632 268 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 ANXA6P08133 673 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 GIMD1P0DJR0 217 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 CTSEP14091 401 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 COMTP21964 271 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 EPHB1P54762 984 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 IFI35P80217 286 aaPredicted RBP13.97□□□□□ -0.17
SEC13-204ENST00000397099 DPTQ07507 201 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 CYP4F3Q08477 520 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 TRAF2Q12933 501 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 SLC14A2Q15849 920 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 PRRT3Q5FWE3 981 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 TFDP3Q5H9I0 405 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 C19orf48Q6RUI8 117 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 GKN2Q86XP6 184 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 CBARPQ8N350 705 aaPredicted RBP13.97□□□□□ -0.17
SEC13-204ENST00000397099 PLD5Q8N7P1 536 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 OR6C4Q8NGE1 309 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 LMX1AQ8TE12 382 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 NAT6Q93015 286 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 GRAMD1AQ96CP6 724 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 NUS1Q96E22 293 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 APOLD1Q96LR9 279 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 COQ10AQ96MF6 247 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 SRPK1Q96SB4 655 aaKnown RBP13.97□□□□□ -0.17
SEC13-204ENST00000397099 ADGRE3Q9BY15 652 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 WDR26Q9H7D7 661 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 IMPACTQ9P2X3 320 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 KLQ9UEF7 1012 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 DOLKQ9UPQ8 538 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 RAXQ9Y2V3 346 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 COQ6Q9Y2Z9 468 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 HEY1Q9Y5J3 304 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 ALG6Q9Y672 507 aa13.97□□□□□ -0.17
SEC13-204ENST00000397099 EPN1Q9Y6I3 576 aaPredicted RBP13.97□□□□□ -0.17
SEC13-204ENST00000397099 BTNL10A8MVZ5 291 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 ZNF189O75820 626 aaPredicted RBP13.96□□□□□ -0.17
SEC13-204ENST00000397099 ZRANB2O95218 330 aaKnown RBP eCLIP13.96□□□□□ -0.17
SEC13-204ENST00000397099 NDUFA10O95299 355 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 PCCBP05166 539 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 CLDN6P56747 220 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms