RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 NR1D1P20393 614 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 CSF2RBP32927 897 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 CLCN1P35523 988 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 RHOAP61586 193 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 GRM3Q14832 879 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 FAM102AQ5T9C2 384 aaPredicted RBP8.46□□□□□ -1.05
SCFD1-202ENST00000396629 ANKS6Q68DC2 871 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 TCTN3Q6NUS6 607 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 ERAP2Q6P179 960 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 ARCQ7LC44 396 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 TIPARPQ7Z3E1 657 aaKnown RBP8.46□□□□□ -1.05
SCFD1-202ENST00000396629 TEX19Q8NA77 164 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 SMARCE1Q969G3 411 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 C18orf8Q96DM3 657 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 RTP4Q96DX8 246 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 LGR4Q9BXB1 951 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 SCAND2PQ9GZW5 306 aaPredicted RBP8.46□□□□□ -1.05
SCFD1-202ENST00000396629 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 PRDM8Q9NQV8 689 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 ZDHHC9Q9Y397 364 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 TMEM184BQ9Y519 407 aaPredicted RBP8.46□□□□□ -1.05
SCFD1-202ENST00000396629 KCTD3Q9Y597 815 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 KCNMB2Q9Y691 235 aa8.46□□□□□ -1.05
SCFD1-202ENST00000396629 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 FAM72CH0Y354 149 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 PPM1DO15297 605 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 RECQL5O94762 991 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 GM2AP17900 193 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 SLC9A1P19634 815 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 TCN2P20062 427 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 GNLYP22749 145 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 ADRA1BP35368 520 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 MC2RQ01718 297 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 RALGDSQ12967 914 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 CYTH1Q15438 398 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 FAM72AQ5TYM5 149 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 NKAIN2Q5VXU1 208 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 FAM72DQ6L9T8 149 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 RWDD4Q6NW29 188 aaKnown RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 TMEM71Q6P5X7 295 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 BRAT1Q6PJG6 821 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 FAM72BQ86X60 149 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 NETO2Q8NC67 525 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 TMEM35BQ8NCS4 154 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 STARD8Q92502 1023 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 CFAP57Q96MR6 1250 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 ZNF641Q96N77 438 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 CRACR2AQ9BSW2 395 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 GSDMCQ9BYG8 508 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 KLC2Q9H0B6 622 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 TRIT1Q9H3H1 467 aaKnown RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 NOL6Q9H6R4 1146 aaKnown RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 CUEDC1Q9NWM3 386 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-202ENST00000396629 TMEM9Q9P0T7 183 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 TAAR2Q9P1P5 351 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 APEX2Q9UBZ4 518 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 ATP8A1Q9Y2Q0 1164 aa8.46□□□□□ -1.06
SCFD1-202ENST00000396629 SHANK1Q9Y566 2161 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-202ENST00000396629 BUB1BO60566 1050 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-202ENST00000396629 VPS4BO75351 444 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 PRKCGP05129 697 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 MPSTP25325 297 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 APBA1Q02410 837 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 RAB6CQ53S08 254 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 LIPIQ6XZB0 460 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 SLC47A2Q86VL8 602 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 DNAAF5Q86Y56 855 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 CCDC13Q8IYE1 715 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 NRSN1Q8IZ57 195 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 UNC5BQ8IZJ1 945 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 NAGSQ8N159 534 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 NELFBQ8WX92 580 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 TBC1D31Q96DN5 1066 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 NCAPGQ9BPX3 1015 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 ZPBPQ9BS86 351 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 MAGEB5Q9BZ81 275 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 RAB6CQ9H0N0 254 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 FBXO8Q9NRD0 319 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 TRNAU1APQ9NX07 287 aaKnown RBP8.45□□□□□ -1.06
SCFD1-202ENST00000396629 MOSPD1Q9UJG1 213 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 AJAP1Q9UKB5 411 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-202ENST00000396629 VPS4AQ9UN37 437 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 MED13Q9UHV7 2174 aa8.45□□□□□ -1.06
SCFD1-202ENST00000396629 TNRC6AQ8NDV7 1962 aaKnown RBP8.45□□□□□ -1.06
SCFD1-202ENST00000396629 BICDL2A1A5D9 508 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 MKRN2OSH3BPM6 223 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 FOXN3O00409 490 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-202ENST00000396629 LRIG2O94898 1065 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 DLGAP3O95886 979 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 FUCA1P04066 466 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 HSP90AA1P07900 732 aaKnown RBP8.44□□□□□ -1.06
SCFD1-202ENST00000396629 RNF224P0DH78 156 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 ILF3Q12906 894 aaKnown RBP eCLIP8.44□□□□□ -1.06
SCFD1-202ENST00000396629 RAPGEF1Q13905 1077 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 MAP7Q14244 749 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 ATP1A1-AS1Q5TC04 95 aa8.44□□□□□ -1.06
SCFD1-202ENST00000396629 AFMIDQ63HM1 303 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms