RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 EPS8L2Q9H6S3 715 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 UTP6Q9NYH9 597 aaKnown RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 TNFSF13BQ9Y275 285 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 BTRCQ9Y297 605 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 TRAF6Q9Y4K3 522 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 H3BMM5 538 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 XYLBO75191 536 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 RSL1D1O76021 490 aaKnown RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 BAIAP3O94812 1187 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 OXSR1O95747 527 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 ATICP31939 592 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 RCVRNP35243 200 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 POLD3Q15054 466 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 PRR23BQ6ZRT6 265 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 SLC26A9Q7LBE3 791 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 ANKFN1Q8N957 763 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 RNF34Q969K3 372 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 VPS33AQ96AX1 596 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 MUS81Q96NY9 551 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 C9orf16Q9BUW7 83 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 ALG9Q9H6U8 611 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 AS3MTQ9HBK9 375 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 TBC1D13Q9NVG8 400 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 EXD2Q9NVH0 621 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 SNTG2Q9NY99 539 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 KRBA1A5PL33 1030 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 LRRC14BA6NHZ5 514 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 LSM1O15116 133 aaKnown RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 SYNCRIPO60506 623 aaKnown RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 IL7RP16871 459 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 MAGP20916 626 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 PROZP22891 400 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 MYF6P23409 242 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 ADSLP30566 484 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 PTPN9P43378 593 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 SNX16P57768 344 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 MOGQ16653 247 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 ZNF362Q5T0B9 420 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 CLEC4FQ8N1N0 589 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 NPWQ8N729 165 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 PCYOX1LQ8NBM8 494 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 TRPC4APQ8TEL6 797 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 BRI3BPQ8WY22 251 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 EDEM1Q92611 657 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 TMEM74Q96NL1 305 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 MED10Q9BTT4 135 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 LRRC4Q9HBW1 653 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 EIF2B3Q9NR50 452 aaKnown RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 PIGVQ9NUD9 493 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-203ENST00000396547 CD300AQ9UGN4 299 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 KIAA1257Q9ULG3 409 aa9.87□□□□□ -0.83
TRIM39-203ENST00000396547 ALBP02768 609 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 BMP2P12643 396 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 JAK1P23458 1154 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 ATP5F1P24539 256 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 ARL1P40616 181 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 OPRL1P41146 370 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 CHRNA4P43681 627 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 GJA8P48165 433 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 GLUD2P49448 558 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 PRMT2P55345 433 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 TRAP1Q12931 704 aaKnown RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 TBPL2Q6SJ96 375 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 NANOGNBQ7Z5D8 188 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 SMG8Q8ND04 991 aaKnown RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 TUBGCP3Q96CW5 907 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 FICDQ9BVA6 458 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 PDZD7Q9H5P4 517 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 ZNF408Q9H9D4 720 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 CASS4Q9NQ75 786 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 TMEM181Q9P2C4 612 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 ANKRD6Q9Y2G4 727 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 USP3Q9Y6I4 520 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 ZBTB42B2RXF5 422 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 E2F6O75461 281 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 ESRRBO95718 433 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 LINC00032P0C843 101 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 AKAP5P24588 427 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 MATKP42679 507 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 SLC1A2P43004 574 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 SLC36A3Q495N2 470 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 PIWIL4Q7Z3Z4 852 aaKnown RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 RALGPS2Q86X27 583 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 FUNDC1Q8IVP5 155 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 RDH11Q8TC12 318 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 SEPT8Q92599 483 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 KCNA7Q96RP8 456 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 HNRNPABQ99729 332 aaKnown RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 PTPN18Q99952 460 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 CCDC68Q9H2F9 335 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 GOLGA2P5Q9HBQ8 144 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 CCM2LQ9NUG4 571 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 GPC6Q9Y625 555 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-203ENST00000396547 CEP350Q5VT06 3117 aa9.86□□□□□ -0.83
TRIM39-203ENST00000396547 A8MT66 165 aa9.85□□□□□ -0.83
TRIM39-203ENST00000396547 H0YJX3 145 aa9.85□□□□□ -0.83
TRIM39-203ENST00000396547 SLC22A2O15244 555 aa9.85□□□□□ -0.83
TRIM39-203ENST00000396547 SIX3O95343 332 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms