RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CYLC2Q14093 348 aaPredicted RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 CCNIQ14094 377 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 GALNT3Q14435 633 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 PDCD2Q16342 344 aaPredicted RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 TYSND1Q2T9J0 566 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ZNF549Q6P9A3 640 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 C16orf89Q6UX73 402 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ISCA2Q86U28 154 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 LDB1Q86U70 411 aaPredicted RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 RNF135Q8IUD6 432 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 PELI3Q8N2H9 469 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 CEP70Q8NHQ1 597 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 MYRFLQ96LU7 910 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ZNF512Q96ME7 567 aaPredicted RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 PRICKLE1Q96MT3 831 aaPredicted RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 CYP4F11Q9HBI6 524 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 NDE1Q9NXR1 346 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 AFF4Q9UHB7 1163 aaKnown RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 POMPQ9Y244 141 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 LRCH1Q9Y2L9 728 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ARIH1Q9Y4X5 557 aaPredicted RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 IMPDH1P20839 514 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 ZNF140P52738 457 aaPredicted RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 EPHB1P54762 984 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 INHBCP55103 352 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 TIAL1Q01085 375 aaKnown RBP eCLIP16.82■□□□□ 0.28
NUP50-202ENST00000396096 IL31Q6EBC2 164 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 CHSY3Q70JA7 882 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 KYQ8NBH2 561 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 OR4L1Q8NH43 312 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 FAM136AQ96C01 138 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 PPP1R36Q96LQ0 422 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 CATSPER2Q96P56 530 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 CINPQ9BW66 212 aaPredicted RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 VN1R3Q9BXE9 311 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 GSTO2Q9H4Y5 243 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 CXorf56Q9H5V9 222 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 SUDS3Q9H7L9 328 aaPredicted RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 MEAF6Q9HAF1 191 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 CATSPERZQ9NTU4 200 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 NLE1Q9NVX2 485 aaPredicted RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 GTSE1Q9NYZ3 720 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 PPM1HQ9ULR3 514 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 HTTP42858 3142 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 STC2O76061 302 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 PDE5AO76074 875 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 PARNO95453 639 aaKnown RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 CRTAMO95727 393 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 HSPA1AP0DMV8 641 aaKnown RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 HSPA1BP0DMV9 641 aaKnown RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 HNRNPLP14866 589 aaKnown RBP eCLIP16.82■□□□□ 0.28
NUP50-202ENST00000396096 RPS24P62847 133 aaKnown RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 SEMA3AQ14563 771 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 GPR158Q5T848 1215 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 TMEM198Q66K66 360 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 DENND1CQ8IV53 801 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 PNPLA1Q8N8W4 532 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 OR13C4Q8NGS5 318 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 LBHD1Q9BQE6 289 aaPredicted RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 NACA2Q9H009 215 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 INTS10Q9NVR2 710 aaKnown RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 TBC1D30Q9Y2I9 924 aa16.82■□□□□ 0.28
NUP50-202ENST00000396096 COPG1Q9Y678 874 aaKnown RBP16.82■□□□□ 0.28
NUP50-202ENST00000396096 GBF1Q92538 1859 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 INSIG1O15503 277 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 ABLIM3O94929 683 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 SEC24AO95486 1093 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 KLKB1P03952 638 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 CD1EP15812 388 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 CD1DP15813 335 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 ALDH7A1P49419 539 aaKnown RBP16.81■□□□□ 0.28
NUP50-202ENST00000396096 STC1P52823 247 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 ARHGEF6Q15052 776 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 PPM1LQ5SGD2 360 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 TRIM68Q6AZZ1 485 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 NXNQ6DKJ4 435 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 ANO7Q6IWH7 933 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 SDCCAG8Q86SQ7 713 aaPredicted RBP16.81■□□□□ 0.28
NUP50-202ENST00000396096 CUZD1Q86UP6 607 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 TRMT2BQ96GJ1 504 aaKnown RBP16.81■□□□□ 0.28
NUP50-202ENST00000396096 CDKN2AIPNLQ96HQ2 116 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 NSMCE3Q96MG7 304 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 ZNF184Q99676 751 aaPredicted RBP16.81■□□□□ 0.28
NUP50-202ENST00000396096 AARSD1Q9BTE6 412 aaKnown RBP16.81■□□□□ 0.28
NUP50-202ENST00000396096 CYP4F12Q9HCS2 524 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 CRYL1Q9Y2S2 319 aa16.81■□□□□ 0.28
NUP50-202ENST00000396096 A0A1B0GVM2 712 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 TCAF2A6NFQ2 919 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 RHOCP08134 193 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 RPL17P18621 184 aaKnown RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 RGRP47804 291 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 NUDT2P50583 147 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 PTPRCAPQ14761 206 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 TAF1AQ15573 450 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 ZNF678Q5SXM1 525 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 PIM3Q86V86 326 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 HPS6Q86YV9 775 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 DSELQ8IZU8 1212 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms